G382315


Basic Information

Item Value
gene id G382315
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 25311339 ~ 25311826 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU434451
ataaagtccctctttatgagcaaaaacctcctttttgtttgcgcgttttgtCCAGTAATCCGAATGCAGAAGGCGCGTGCACTAATTCCAGGACGAAACgtttttaaaaagtacaataaaagttagtagaaacatgccaaacgatgtttaaaatcaatcttccggttgtttttgtcataaataatcaataacatttcaaccggacaaaagcttcgtcaataggaaaggagaaacaagaaaggcgcgttCTCGATCAGGGCGCATGGCTGAtgaatggaaatttccactggccactgattgaaagtgctgtatctccctcatttttcagagtaaaagcctgaaacaatgcctaaagactggtcacCTGTAGAGGAAGGCACAGAGCTCGTGACCTGGGTCCtaaagtctttgtatggtggataggctttcaatggaaaaacagcctttcaaaataatagtacttcctggttggattttcctctggtttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU434451 True 488 lncRNA 0.41 1 25311339 25311826

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-10 NA coding upstream 591908 24719360 ~ 24719431 (+)
trnaa-ugc-9 NA coding upstream 606553 24704715 ~ 24704786 (+)
LOC110523483 LOC106567618 coding upstream 667327 24635703 ~ 24644012 (+)
LOC110523479 srek1 coding upstream 837734 24432802 ~ 24528819 (+)
zmp:0000000846 LOC106567724 coding upstream 1229385 24040145 ~ 24081954 (+)
aqp3b LOC106567539 coding downstream 107879 25419705 ~ 25424226 (+)
LOC110523493 LOC106567525 coding downstream 162087 25473913 ~ 25482789 (+)
LOC110523494 NA coding downstream 217083 25528909 ~ 25561013 (+)
cacna1b cacna1b coding downstream 361074 25672900 ~ 25793763 (+)
LOC110523500 LOC106567252 coding downstream 557917 25869743 ~ 25938520 (+)
G382311 NA non-coding upstream 1059 25307974 ~ 25310280 (+)
G382307 NA non-coding upstream 5829 25305293 ~ 25305510 (+)
G382305 NA non-coding upstream 8128 25302979 ~ 25303211 (+)
G382247 NA non-coding upstream 44479 25266652 ~ 25266860 (+)
G382194 NA non-coding upstream 80558 25230552 ~ 25230781 (+)
G382340 NA non-coding downstream 24721 25336547 ~ 25336887 (+)
G382341 NA non-coding downstream 26279 25338105 ~ 25338335 (+)
G382476 NA non-coding downstream 123712 25435538 ~ 25435807 (+)
G382478 NA non-coding downstream 130933 25442759 ~ 25449570 (+)
G382497 NA non-coding downstream 141046 25452872 ~ 25453094 (+)
G382186 NA other upstream 85609 25225442 ~ 25225730 (+)
G381239 NA other upstream 534910 24687739 ~ 24776429 (+)
LOC110523468 vamp5 other upstream 1466994 23838502 ~ 23844345 (+)
G380340 NA other upstream 1569880 23740434 ~ 23741459 (+)
LOC110522832 LOC106567816 other upstream 1674248 23623921 ~ 23678038 (+)
LOC110523503 NA other downstream 863119 26174884 ~ 26186710 (+)
LOC110522865 LOC106567246 other downstream 1125793 26437517 ~ 26502284 (+)
G383794 LOC106566282 other downstream 1350012 26661838 ~ 26663613 (+)
LOC110522888 LOC106566402 other downstream 2363526 27675352 ~ 27719165 (+)
G385053 NA other downstream 2394888 27706714 ~ 27707078 (+)

Expression


Co-expression Network