G382673


Basic Information

Item Value
gene id G382673
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 25782396 ~ 25782611 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU434835
ATTTACACTCAGAGCTGCAACAAGcgctgcagcagtaatgaatgaggaGGAAAGTGTATCTATAGGCGTTGTTGTTATAATTAGCcgcttgggtcttttttaatgTCGAGGAATATTttactttctctgttcataggagtaacaacatgaatgtgGTGCGACTTGAgattcgccatcagctggaacgGTTGgttccctttttggtcagtgtcagtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU434835 True 216 lncRNA 0.43 1 25782396 25782611

Neighbor

gene id symbol gene type direction distance location
LOC110523494 NA coding upstream 221383 25528909 ~ 25561013 (+)
LOC110523493 LOC106567525 coding upstream 299607 25473913 ~ 25482789 (+)
aqp3b LOC106567539 coding upstream 358170 25419705 ~ 25424226 (+)
trnaa-ugc-10 NA coding upstream 1062965 24719360 ~ 24719431 (+)
trnaa-ugc-9 NA coding upstream 1077610 24704715 ~ 24704786 (+)
LOC110523500 LOC106567252 coding downstream 87132 25869743 ~ 25938520 (+)
LOC110522854 LOC106563131 coding downstream 169483 25952094 ~ 25955508 (+)
whrna LOC106567256 coding downstream 213037 25995648 ~ 26149621 (+)
LOC118964579 LOC106567353 coding downstream 379472 26162083 ~ 26166903 (+)
LOC110523503 NA coding downstream 392273 26174884 ~ 26186710 (+)
G382670 NA non-coding upstream 6579 25775600 ~ 25775817 (+)
G382598 NA non-coding upstream 157531 25624113 ~ 25624865 (+)
G382504 NA non-coding upstream 324735 25457260 ~ 25457661 (+)
G382497 NA non-coding upstream 329302 25452872 ~ 25453094 (+)
cacna1b cacna1b non-coding downstream 10173 25672900 ~ 25793763 (+)
G382652 NA non-coding downstream 11490 25794101 ~ 25795410 (+)
G382689 NA non-coding downstream 24126 25806737 ~ 25815563 (+)
G382795 NA non-coding downstream 197790 25980401 ~ 25980628 (+)
G382895 NA non-coding downstream 332414 26115025 ~ 26471390 (+)
G382186 NA other upstream 556666 25225442 ~ 25225730 (+)
G381239 NA other upstream 1005967 24687739 ~ 24776429 (+)
LOC110523468 vamp5 other upstream 1938051 23838502 ~ 23844345 (+)
G380340 NA other upstream 2040937 23740434 ~ 23741459 (+)
LOC110522832 LOC106567816 other upstream 2145305 23623921 ~ 23678038 (+)
LOC110522865 LOC106567246 other downstream 655008 26437517 ~ 26502284 (+)
G383794 LOC106566282 other downstream 879227 26661838 ~ 26663613 (+)
LOC110522888 LOC106566402 other downstream 1892741 27675352 ~ 27719165 (+)
G385053 NA other downstream 1924103 27706714 ~ 27707078 (+)

Expression


Co-expression Network