Gene
RNA
| Item | Value |
|---|---|
| gene id | G382795 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 25980401 ~ 25980628 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU434966 | True | 228 | lncRNA | 0.44 | 1 | 25980401 | 25980628 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522854 | LOC106563131 | coding | upstream | 24893 | 25952094 ~ 25955508 (+) |
| LOC110523500 | LOC106567252 | coding | upstream | 41881 | 25869743 ~ 25938520 (+) |
| cacna1b | cacna1b | coding | upstream | 187402 | 25672900 ~ 25793763 (+) |
| LOC110523494 | NA | coding | upstream | 419388 | 25528909 ~ 25561013 (+) |
| LOC110523493 | LOC106567525 | coding | upstream | 497612 | 25473913 ~ 25482789 (+) |
| whrna | LOC106567256 | coding | downstream | 15020 | 25995648 ~ 26149621 (+) |
| LOC118964579 | LOC106567353 | coding | downstream | 181455 | 26162083 ~ 26166903 (+) |
| LOC110523503 | NA | coding | downstream | 194256 | 26174884 ~ 26186710 (+) |
| LOC110523506 | LOC106567292 | coding | downstream | 256676 | 26237304 ~ 26276613 (+) |
| LOC110523505 | LOC106567281 | coding | downstream | 304579 | 26285207 ~ 26309671 (+) |
| G382689 | NA | non-coding | upstream | 164838 | 25806737 ~ 25815563 (+) |
| G382652 | NA | non-coding | upstream | 184991 | 25794101 ~ 25795410 (+) |
| G382673 | NA | non-coding | upstream | 197790 | 25782396 ~ 25782611 (+) |
| G382670 | NA | non-coding | upstream | 204584 | 25775600 ~ 25775817 (+) |
| G382895 | NA | non-coding | downstream | 134397 | 26115025 ~ 26471390 (+) |
| G382811 | NA | non-coding | downstream | 171997 | 26152625 ~ 26153458 (+) |
| G382815 | NA | non-coding | downstream | 186574 | 26167202 ~ 26168148 (+) |
| G382925 | NA | non-coding | downstream | 210406 | 26191034 ~ 26199874 (+) |
| G383018 | NA | non-coding | downstream | 380349 | 26360977 ~ 26447516 (+) |
| G382186 | NA | other | upstream | 754671 | 25225442 ~ 25225730 (+) |
| G381239 | NA | other | upstream | 1203972 | 24687739 ~ 24776429 (+) |
| LOC110523468 | vamp5 | other | upstream | 2136056 | 23838502 ~ 23844345 (+) |
| G380340 | NA | other | upstream | 2238942 | 23740434 ~ 23741459 (+) |
| LOC110522832 | LOC106567816 | other | upstream | 2343310 | 23623921 ~ 23678038 (+) |
| LOC110522865 | LOC106567246 | other | downstream | 456991 | 26437517 ~ 26502284 (+) |
| G383794 | LOC106566282 | other | downstream | 681210 | 26661838 ~ 26663613 (+) |
| LOC110522888 | LOC106566402 | other | downstream | 1694724 | 27675352 ~ 27719165 (+) |
| G385053 | NA | other | downstream | 1726086 | 27706714 ~ 27707078 (+) |
