G382895


Basic Information

Item Value
gene id G382895
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 26115025 ~ 26471390 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU435069
TTTTGGGAGCCTGGCCGGTATGAGATGGTAAACCGAAAcctggtgaaaaacatggcccatctagcctgacgtggatttagtcatactcgagattacgatggtcagtccagatgagaaaagggtgtttcgccccctcaagccaatgtctccacaccttcagagccttgactacagctaacaactcccggtcccccacatcatagtttcgctccgctggaCCGAGCTTTCTCGAAAAGAAGGCACAAGGGCGGAGCTTGGGTGGCACGCCCGAGCGCTGGGACAGCACGGCCCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU435069 True 292 lncRNA 0.55 2 26115025 26471390

Neighbor

gene id symbol gene type direction distance location
LOC110522854 LOC106563131 coding upstream 159517 25952094 ~ 25955508 (+)
LOC110523500 LOC106567252 coding upstream 176505 25869743 ~ 25938520 (+)
cacna1b cacna1b coding upstream 322026 25672900 ~ 25793763 (+)
LOC110523494 NA coding upstream 554012 25528909 ~ 25561013 (+)
LOC110523493 LOC106567525 coding upstream 632236 25473913 ~ 25482789 (+)
pus1 pus1 coding downstream 382681 26854071 ~ 26877217 (+)
noc4l noc4l coding downstream 406126 26877516 ~ 26884592 (+)
LOC110523521 vps29 coding downstream 413497 26884887 ~ 26887645 (+)
atpbb LOC106566318 coding downstream 418584 26889974 ~ 26892420 (+)
LOC110523522 arpc3 coding downstream 421082 26892472 ~ 26895096 (+)
G382795 NA non-coding upstream 134397 25980401 ~ 25980628 (+)
G382689 NA non-coding upstream 299462 25806737 ~ 25815563 (+)
G382652 NA non-coding upstream 319615 25794101 ~ 25795410 (+)
G382673 NA non-coding upstream 332414 25782396 ~ 25782611 (+)
G383082 NA non-coding downstream 4726 26476116 ~ 26482496 (+)
G383723 NA non-coding downstream 46808 26518198 ~ 26520171 (+)
G383750 NA non-coding downstream 79066 26550456 ~ 26579192 (+)
G383755 NA non-coding downstream 108857 26580247 ~ 26580534 (+)
G383758 NA non-coding downstream 113179 26584569 ~ 26584974 (+)
G382186 NA other upstream 889295 25225442 ~ 25225730 (+)
G381239 NA other upstream 1338596 24687739 ~ 24776429 (+)
LOC110523468 vamp5 other upstream 2270680 23838502 ~ 23844345 (+)
G380340 NA other upstream 2373566 23740434 ~ 23741459 (+)
LOC110522832 LOC106567816 other upstream 2477934 23623921 ~ 23678038 (+)
G383794 LOC106566282 other downstream 190448 26661838 ~ 26663613 (+)
LOC110522888 LOC106566402 other downstream 1203962 27675352 ~ 27719165 (+)
G385053 NA other downstream 1235324 27706714 ~ 27707078 (+)
G385171 LOC106566130 other downstream 1433077 27904467 ~ 27904731 (+)
G385805 NA other downstream 1945215 28416605 ~ 28417555 (+)

Expression


Co-expression Network