Gene
RNA
| Item | Value |
|---|---|
| gene id | G383082 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 26476116 ~ 26482496 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU435282 | False | 312 | lncRNA | 0.39 | 2 | 26476116 | 26482496 |
| TU435283 | True | 446 | lncRNA | 0.39 | 3 | 26476116 | 26481646 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pnpla7a | NA | coding | upstream | 78663 | 26393838 ~ 26397453 (+) |
| LOC110522858 | LOC106563124 | coding | upstream | 89446 | 26385129 ~ 26386670 (+) |
| LOC110523509 | LOC106567323 | coding | upstream | 106315 | 26365281 ~ 26369801 (+) |
| LOC110523508 | LOC106567317 | coding | upstream | 124168 | 26313498 ~ 26351948 (+) |
| LOC110523505 | LOC106567281 | coding | upstream | 166445 | 26285207 ~ 26309671 (+) |
| pus1 | pus1 | coding | downstream | 371575 | 26854071 ~ 26877217 (+) |
| noc4l | noc4l | coding | downstream | 395020 | 26877516 ~ 26884592 (+) |
| LOC110523521 | vps29 | coding | downstream | 402391 | 26884887 ~ 26887645 (+) |
| atpbb | LOC106566318 | coding | downstream | 407478 | 26889974 ~ 26892420 (+) |
| LOC110523522 | arpc3 | coding | downstream | 409976 | 26892472 ~ 26895096 (+) |
| G382895 | NA | non-coding | upstream | 4726 | 26115025 ~ 26471390 (+) |
| G383018 | NA | non-coding | upstream | 28600 | 26360977 ~ 26447516 (+) |
| G382925 | NA | non-coding | upstream | 276242 | 26191034 ~ 26199874 (+) |
| G382815 | NA | non-coding | upstream | 307968 | 26167202 ~ 26168148 (+) |
| G382811 | NA | non-coding | upstream | 322658 | 26152625 ~ 26153458 (+) |
| G383723 | NA | non-coding | downstream | 35702 | 26518198 ~ 26520171 (+) |
| G383750 | NA | non-coding | downstream | 67960 | 26550456 ~ 26579192 (+) |
| G383755 | NA | non-coding | downstream | 97751 | 26580247 ~ 26580534 (+) |
| G383758 | NA | non-coding | downstream | 102073 | 26584569 ~ 26584974 (+) |
| G383752 | NA | non-coding | downstream | 111048 | 26593544 ~ 26630324 (+) |
| LOC110522865 | LOC106567246 | other | upstream | 15420 | 26437517 ~ 26502284 (+) |
| LOC110523503 | NA | other | upstream | 289426 | 26174884 ~ 26186710 (+) |
| G382186 | NA | other | upstream | 1250386 | 25225442 ~ 25225730 (+) |
| G381239 | NA | other | upstream | 1699687 | 24687739 ~ 24776429 (+) |
| LOC110523468 | vamp5 | other | upstream | 2631771 | 23838502 ~ 23844345 (+) |
| G383794 | LOC106566282 | other | downstream | 179342 | 26661838 ~ 26663613 (+) |
| LOC110522888 | LOC106566402 | other | downstream | 1192856 | 27675352 ~ 27719165 (+) |
| G385053 | NA | other | downstream | 1224218 | 27706714 ~ 27707078 (+) |
| G385171 | LOC106566130 | other | downstream | 1421971 | 27904467 ~ 27904731 (+) |
| G385805 | NA | other | downstream | 1934109 | 28416605 ~ 28417555 (+) |
