G383792


Basic Information

Item Value
gene id G383792
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 26658660 ~ 26660664 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU436046
TTTCGATGCAGCATCTTGATCTCACGCTCCATGTCATGTTTTTGGTCCTGCAGTTTTTTGACGGAGCCAGGTCTGTGATCACGAGGTTGTCGTGGAGTTTTACGGCTCGGTGTTGCTCCACCTCGTCCTCCAGCTCAAAGATGGTCTCCTTAATGTCTGAGACCTCAGtgtccctctcctccagctcAGAACACTGATGGGCCAGGGCCCGCTTCTGCTCTGCTAGCTGCTTCTGCACCTCATCACGAAACGCACGGAAGTTCTCCTCCAG

Function

NR:

description
cytospin-A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU436046 True 271 lncRNA 0.54 2 26658660 26660664

Neighbor

gene id symbol gene type direction distance location
LOC110522865 LOC106567246 coding upstream 156376 26437517 ~ 26502284 (+)
pnpla7a NA coding upstream 261207 26393838 ~ 26397453 (+)
LOC110522858 LOC106563124 coding upstream 271990 26385129 ~ 26386670 (+)
LOC110523509 LOC106567323 coding upstream 288859 26365281 ~ 26369801 (+)
LOC110523508 LOC106567317 coding upstream 306712 26313498 ~ 26351948 (+)
pus1 pus1 coding downstream 193407 26854071 ~ 26877217 (+)
noc4l noc4l coding downstream 216852 26877516 ~ 26884592 (+)
LOC110523521 vps29 coding downstream 224223 26884887 ~ 26887645 (+)
atpbb LOC106566318 coding downstream 229310 26889974 ~ 26892420 (+)
LOC110523522 arpc3 coding downstream 231808 26892472 ~ 26895096 (+)
G383791 LOC106566282 non-coding upstream 510 26657866 ~ 26658150 (+)
G383778 NA non-coding upstream 23535 26634713 ~ 26635125 (+)
G383752 NA non-coding upstream 28336 26593544 ~ 26630324 (+)
G383774 NA non-coding upstream 29075 26625991 ~ 26629585 (+)
G383758 NA non-coding upstream 73686 26584569 ~ 26584974 (+)
G383886 LOC105014832 non-coding downstream 150131 26810795 ~ 26816187 (+)
G383931 NA non-coding downstream 198181 26858845 ~ 26859212 (+)
G383936 NA non-coding downstream 204676 26865340 ~ 26865620 (+)
G383895 NA non-coding downstream 241124 26901788 ~ 26905762 (+)
G383971 NA non-coding downstream 295924 26956588 ~ 26957041 (+)
LOC110523503 NA other upstream 471970 26174884 ~ 26186710 (+)
G382186 NA other upstream 1432930 25225442 ~ 25225730 (+)
G381239 NA other upstream 1882231 24687739 ~ 24776429 (+)
LOC110523468 vamp5 other upstream 2814315 23838502 ~ 23844345 (+)
G383794 LOC106566282 other downstream 1174 26661838 ~ 26663613 (+)
LOC110522888 LOC106566402 other downstream 1014688 27675352 ~ 27719165 (+)
G385053 NA other downstream 1046050 27706714 ~ 27707078 (+)
G385171 LOC106566130 other downstream 1243803 27904467 ~ 27904731 (+)
G385805 NA other downstream 1755941 28416605 ~ 28417555 (+)

Expression


Co-expression Network