G383936


Basic Information

Item Value
gene id G383936
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 26865340 ~ 26865620 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU436198
AGTATGCCAAGAGCTGGCAGCAAGGGTATAGGtttgctgttagaaccagtaaaggccacaCTTGGATAGTGGAATTTCTTTGGCTTCtgtccaggcctgaggacaaagactttcctctaggctcagattaaagatatgactgataggagtggctatagagccagctaccatcctcagtagctttccatctaagttgtcaatgccaggaggtttgtcattattgatcgataacaataatttttccacctctcccacactaactttacaaaattcaaacttgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU436198 True 281 lncRNA 0.43 1 26865340 26865620

Neighbor

gene id symbol gene type direction distance location
LOC110522865 LOC106567246 coding upstream 363056 26437517 ~ 26502284 (+)
pnpla7a NA coding upstream 467887 26393838 ~ 26397453 (+)
LOC110522858 LOC106563124 coding upstream 478670 26385129 ~ 26386670 (+)
LOC110523509 LOC106567323 coding upstream 495539 26365281 ~ 26369801 (+)
LOC110523508 LOC106567317 coding upstream 513392 26313498 ~ 26351948 (+)
noc4l noc4l coding downstream 11896 26877516 ~ 26884592 (+)
LOC110523521 vps29 coding downstream 19267 26884887 ~ 26887645 (+)
atpbb LOC106566318 coding downstream 24354 26889974 ~ 26892420 (+)
LOC110523522 arpc3 coding downstream 26852 26892472 ~ 26895096 (+)
LOC110523526 LOC106566370 coding downstream 719985 27585605 ~ 27657306 (+)
G383931 NA non-coding upstream 6128 26858845 ~ 26859212 (+)
G383886 LOC105014832 non-coding upstream 49153 26810795 ~ 26816187 (+)
G383792 NA non-coding upstream 204676 26658660 ~ 26660664 (+)
G383791 LOC106566282 non-coding upstream 207190 26657866 ~ 26658150 (+)
G383778 NA non-coding upstream 230215 26634713 ~ 26635125 (+)
G383895 NA non-coding downstream 36168 26901788 ~ 26905762 (+)
G383971 NA non-coding downstream 90968 26956588 ~ 26957041 (+)
G384003 NA non-coding downstream 137954 27003574 ~ 27004136 (+)
G384058 NA non-coding downstream 214842 27080462 ~ 27080702 (+)
G384073 NA non-coding downstream 243180 27108800 ~ 27109029 (+)
G383794 LOC106566282 other upstream 201727 26661838 ~ 26663613 (+)
LOC110523503 NA other upstream 678650 26174884 ~ 26186710 (+)
G382186 NA other upstream 1639610 25225442 ~ 25225730 (+)
G381239 NA other upstream 2088911 24687739 ~ 24776429 (+)
LOC110522888 LOC106566402 other downstream 809732 27675352 ~ 27719165 (+)
G385053 NA other downstream 841094 27706714 ~ 27707078 (+)
G385171 LOC106566130 other downstream 1038847 27904467 ~ 27904731 (+)
G385805 NA other downstream 1550985 28416605 ~ 28417555 (+)
spag8 LOC106566715 other downstream 2060657 28926263 ~ 28931410 (+)

Expression


Co-expression Network