Gene
RNA
| Item | Value |
|---|---|
| gene id | G384441 |
| gene name | noc4l |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 26880426 ~ 26881312 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| noc4l | Predicted to act upstream of or within ribosome biogenesis. Predicted to be located in nuclear membrane. Predicted to be integral component of membrane. Predicted to be part of Noc4p-Nop14p complex and small-subunit processome. Predicted to be active in nucleolus. Is expressed in several structures, including alar plate midbrain region; head; immature eye; midbrain; and segmental plate. Orthologous to human NOC4L (nucleolar complex associated 4 homolog). |
| description |
|---|
| nucleolar complex protein 4 homolog |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU436736 | True | 352 | lncRNA | 0.51 | 3 | 26880426 | 26881312 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523517 | LOC106566303 | coding | downstream | 25247 | 26810766 ~ 26855179 (-) |
| LOC110523515 | LOC106566295 | coding | downstream | 76313 | 26669887 ~ 26804113 (-) |
| LOC110523516 | LOC106563144 | coding | downstream | 210612 | 26629389 ~ 26669814 (-) |
| LOC110523514 | LOC106566259 | coding | downstream | 256326 | 26593074 ~ 26624100 (-) |
| snrpd3l | smd3 | coding | downstream | 305380 | 26572932 ~ 26575046 (-) |
| LOC110523523 | ub2g1 | coding | upstream | 13930 | 26895242 ~ 26898873 (-) |
| ulk1b | NA | coding | upstream | 20465 | 26901777 ~ 26937060 (-) |
| mmp17a | mmp17 | coding | upstream | 81689 | 26963001 ~ 27064380 (-) |
| LOC110522882 | sfswap | coding | upstream | 259198 | 27140510 ~ 27281507 (-) |
| LOC110522892 | LOC106563163 | coding | upstream | 883543 | 27764855 ~ 27944738 (-) |
| G384440 | noc4l | non-coding | downstream | 917 | 26877493 ~ 26879509 (-) |
| G384357 | NA | non-coding | downstream | 141641 | 26736798 ~ 26738785 (-) |
| G384328 | NA | non-coding | downstream | 192045 | 26681696 ~ 26688381 (-) |
| G384313 | NA | non-coding | downstream | 241941 | 26637869 ~ 26638485 (-) |
| G384443 | vps29 | non-coding | upstream | 5177 | 26886489 ~ 26887091 (-) |
| G384464 | NA | non-coding | upstream | 60080 | 26941392 ~ 26941877 (-) |
| G384473 | NA | non-coding | upstream | 69474 | 26950786 ~ 26951277 (-) |
| G384477 | NA | non-coding | upstream | 73693 | 26955005 ~ 26955236 (-) |
| G384481 | NA | non-coding | upstream | 79361 | 26960673 ~ 27002529 (-) |
| G383422 | NA | other | downstream | 881646 | 25996806 ~ 25998780 (-) |
| LOC110523492 | LOC106567536 | other | downstream | 1438632 | 25437411 ~ 25441794 (-) |
| G380648 | NA | other | downstream | 3118619 | 23759039 ~ 23761807 (-) |
| G380610 | LOC106567829 | other | downstream | 3168535 | 23709798 ~ 23711891 (-) |
| LOC110522831 | LOC106563032 | other | downstream | 3323883 | 23488916 ~ 23556681 (-) |
| G385617 | NA | other | upstream | 1127955 | 28009267 ~ 28010077 (-) |
| G385769 | NA | other | upstream | 1333231 | 28214543 ~ 28214819 (-) |
| G386126 | NA | other | upstream | 1470463 | 28351775 ~ 28354745 (-) |
| G386222 | NA | other | upstream | 1609654 | 28490966 ~ 28491372 (-) |
| anapc2 | LOC106566731 | other | upstream | 2122371 | 28994099 ~ 29004755 (-) |
