Item | Value |
---|---|
gene id | G384088 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048569.1 |
NCBI id | CM023223.2 |
chromosome length | 100798064 |
location | 27127197 ~ 27127406 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU436352 | True | 210 | lncRNA | 0.48 | 1 | 27127197 | 27127406 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110523522 | arpc3 | coding | upstream | 232101 | 26892472 ~ 26895096 (+) |
atpbb | LOC106566318 | coding | upstream | 234777 | 26889974 ~ 26892420 (+) |
LOC110523521 | vps29 | coding | upstream | 239552 | 26884887 ~ 26887645 (+) |
noc4l | noc4l | coding | upstream | 242605 | 26877516 ~ 26884592 (+) |
pus1 | pus1 | coding | upstream | 249980 | 26854071 ~ 26877217 (+) |
LOC110523526 | LOC106566370 | coding | downstream | 458199 | 27585605 ~ 27657306 (+) |
LOC118964580 | LOC108247247 | coding | downstream | 484351 | 27611757 ~ 27613814 (+) |
LOC110523527 | LOC106567169 | coding | downstream | 531738 | 27659144 ~ 27664034 (+) |
LOC110522888 | LOC106566402 | coding | downstream | 547956 | 27675352 ~ 27719165 (+) |
LOC118964522 | NA | coding | downstream | 608472 | 27735878 ~ 27741089 (+) |
G384087 | NA | non-coding | upstream | 1115 | 27125783 ~ 27126082 (+) |
G384080 | NA | non-coding | upstream | 10201 | 27116768 ~ 27116996 (+) |
G384074 | NA | non-coding | upstream | 16075 | 27110888 ~ 27111122 (+) |
G384073 | NA | non-coding | upstream | 18168 | 27108800 ~ 27109029 (+) |
G384058 | NA | non-coding | upstream | 46495 | 27080462 ~ 27080702 (+) |
G384090 | NA | non-coding | downstream | 5435 | 27132841 ~ 27133132 (+) |
G384092 | NA | non-coding | downstream | 10124 | 27137530 ~ 27137733 (+) |
G384200 | sfswap | non-coding | downstream | 134846 | 27262252 ~ 27266510 (+) |
G384770 | NA | non-coding | downstream | 241051 | 27368457 ~ 27368693 (+) |
G384773 | NA | non-coding | downstream | 243523 | 27370929 ~ 27371347 (+) |
G383794 | LOC106566282 | other | upstream | 463584 | 26661838 ~ 26663613 (+) |
LOC110522865 | LOC106567246 | other | upstream | 666501 | 26437517 ~ 26502284 (+) |
LOC110523503 | NA | other | upstream | 940507 | 26174884 ~ 26186710 (+) |
G382186 | NA | other | upstream | 1901467 | 25225442 ~ 25225730 (+) |
G381239 | NA | other | upstream | 2350768 | 24687739 ~ 24776429 (+) |
G385053 | NA | other | downstream | 579308 | 27706714 ~ 27707078 (+) |
G385171 | LOC106566130 | other | downstream | 777061 | 27904467 ~ 27904731 (+) |
G385805 | NA | other | downstream | 1289199 | 28416605 ~ 28417555 (+) |
spag8 | LOC106566715 | other | downstream | 1798871 | 28926263 ~ 28931410 (+) |