G384088



Basic Information


Item Value
gene id G384088
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 27127197 ~ 27127406 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU436352
ccacaATCGAAAATCAGTGGCAATCATTTTACCCAATGCAAtatcaatttggccttgttttgctacagacatAGACTTTGGCATAAACTGGTCCATAGAAGACTGCGTTGTTGTGGGTCGCAgagtaggcctacttgactgagtggatacatctccacgtgtggaggtgctggctccaccactatcactagcaggcccgctagtttctcg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU436352 True 210 lncRNA 0.48 1 27127197 27127406

Neighbor


gene id symbol gene type direction distance location
LOC110523522 arpc3 coding upstream 232101 26892472 ~ 26895096 (+)
atpbb LOC106566318 coding upstream 234777 26889974 ~ 26892420 (+)
LOC110523521 vps29 coding upstream 239552 26884887 ~ 26887645 (+)
noc4l noc4l coding upstream 242605 26877516 ~ 26884592 (+)
pus1 pus1 coding upstream 249980 26854071 ~ 26877217 (+)
LOC110523526 LOC106566370 coding downstream 458199 27585605 ~ 27657306 (+)
LOC118964580 LOC108247247 coding downstream 484351 27611757 ~ 27613814 (+)
LOC110523527 LOC106567169 coding downstream 531738 27659144 ~ 27664034 (+)
LOC110522888 LOC106566402 coding downstream 547956 27675352 ~ 27719165 (+)
LOC118964522 NA coding downstream 608472 27735878 ~ 27741089 (+)
G384087 NA non-coding upstream 1115 27125783 ~ 27126082 (+)
G384080 NA non-coding upstream 10201 27116768 ~ 27116996 (+)
G384074 NA non-coding upstream 16075 27110888 ~ 27111122 (+)
G384073 NA non-coding upstream 18168 27108800 ~ 27109029 (+)
G384058 NA non-coding upstream 46495 27080462 ~ 27080702 (+)
G384090 NA non-coding downstream 5435 27132841 ~ 27133132 (+)
G384092 NA non-coding downstream 10124 27137530 ~ 27137733 (+)
G384200 sfswap non-coding downstream 134846 27262252 ~ 27266510 (+)
G384770 NA non-coding downstream 241051 27368457 ~ 27368693 (+)
G384773 NA non-coding downstream 243523 27370929 ~ 27371347 (+)
G383794 LOC106566282 other upstream 463584 26661838 ~ 26663613 (+)
LOC110522865 LOC106567246 other upstream 666501 26437517 ~ 26502284 (+)
LOC110523503 NA other upstream 940507 26174884 ~ 26186710 (+)
G382186 NA other upstream 1901467 25225442 ~ 25225730 (+)
G381239 NA other upstream 2350768 24687739 ~ 24776429 (+)
G385053 NA other downstream 579308 27706714 ~ 27707078 (+)
G385171 LOC106566130 other downstream 777061 27904467 ~ 27904731 (+)
G385805 NA other downstream 1289199 28416605 ~ 28417555 (+)
spag8 LOC106566715 other downstream 1798871 28926263 ~ 28931410 (+)

Expression



Co-expression Network