G384917


Basic Information

Item Value
gene id G384917
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 27484354 ~ 27484556 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU437238
TTTACACTTTTGCAAAAAGTGTGTTATAAAATTAcaaactgagtgtaaagcagaGAATGTGCATTCAGTTTGGCACACTTGGTAAATGCATTGGCTACAAGTGTTAATGGTTTCAGAGATAGTGCTTCAAGAATCACTGTTTGTGTTTAAGCATTCAGAAAAAACAAATGTCTAAAAtgcatttccctccctccctccaattc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU437238 True 203 lncRNA 0.35 1 27484354 27484556

Neighbor

gene id symbol gene type direction distance location
LOC110523522 arpc3 coding upstream 589258 26892472 ~ 26895096 (+)
atpbb LOC106566318 coding upstream 591934 26889974 ~ 26892420 (+)
LOC110523521 vps29 coding upstream 596709 26884887 ~ 26887645 (+)
noc4l noc4l coding upstream 599762 26877516 ~ 26884592 (+)
pus1 pus1 coding upstream 607137 26854071 ~ 26877217 (+)
LOC110523526 LOC106566370 coding downstream 101049 27585605 ~ 27657306 (+)
LOC118964580 LOC108247247 coding downstream 127201 27611757 ~ 27613814 (+)
LOC110523527 LOC106567169 coding downstream 174588 27659144 ~ 27664034 (+)
LOC110522888 LOC106566402 coding downstream 190806 27675352 ~ 27719165 (+)
LOC118964522 NA coding downstream 251322 27735878 ~ 27741089 (+)
G384773 NA non-coding upstream 113007 27370929 ~ 27371347 (+)
G384770 NA non-coding upstream 115661 27368457 ~ 27368693 (+)
G384200 sfswap non-coding upstream 217844 27262252 ~ 27266510 (+)
G384092 NA non-coding upstream 346621 27137530 ~ 27137733 (+)
G384090 NA non-coding upstream 351222 27132841 ~ 27133132 (+)
G384972 NA non-coding downstream 64178 27548734 ~ 27678932 (+)
G385044 NA non-coding downstream 203599 27688155 ~ 27688671 (+)
G385139 NA non-coding downstream 372124 27856680 ~ 27856887 (+)
G385144 NA non-coding downstream 378734 27863290 ~ 27891266 (+)
G385172 LOC106566130 non-coding downstream 420489 27905045 ~ 27905332 (+)
G383794 LOC106566282 other upstream 820741 26661838 ~ 26663613 (+)
LOC110522865 LOC106567246 other upstream 1023658 26437517 ~ 26502284 (+)
LOC110523503 NA other upstream 1297664 26174884 ~ 26186710 (+)
G382186 NA other upstream 2258624 25225442 ~ 25225730 (+)
G381239 NA other upstream 2707925 24687739 ~ 24776429 (+)
G385053 NA other downstream 222158 27706714 ~ 27707078 (+)
G385171 LOC106566130 other downstream 419911 27904467 ~ 27904731 (+)
G385805 NA other downstream 932049 28416605 ~ 28417555 (+)
spag8 LOC106566715 other downstream 1441721 28926263 ~ 28931410 (+)

Expression


Co-expression Network