G385139


Basic Information

Item Value
gene id G385139
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 27856680 ~ 27856887 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU437478
atttaatttgattgcttttttgattttcgtgacaaggttgcctgctgctagcaaggcataatgctatgctagtctatcgataaacttacacaaatgcttgtctagctttggctgtaaagcatattttgaacatctgagatgacagggtgattaacaaaaggctaagctgtgttccactgtatatttcacttgtgattttcccGCATCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU437478 True 208 lncRNA 0.38 1 27856680 27856887

Neighbor

gene id symbol gene type direction distance location
LOC118964522 NA coding upstream 115591 27735878 ~ 27741089 (+)
LOC110522888 LOC106566402 coding upstream 137515 27675352 ~ 27719165 (+)
LOC110523527 LOC106567169 coding upstream 192646 27659144 ~ 27664034 (+)
LOC110523526 LOC106566370 coding upstream 199374 27585605 ~ 27657306 (+)
LOC118964580 LOC108247247 coding upstream 242866 27611757 ~ 27613814 (+)
LOC110523528 nsma3 coding downstream 125758 27982645 ~ 27994423 (+)
si:ch211-222n4.2 LOC106566406 coding downstream 151186 28008073 ~ 28016052 (+)
LOC110523531 LOC106566436 coding downstream 195734 28052621 ~ 28067973 (+)
LOC110523534 LOC106566461 coding downstream 252935 28109822 ~ 28112779 (+)
ftsj1 LOC106566467 coding downstream 371126 28228013 ~ 28235500 (+)
G385044 NA non-coding upstream 168009 27688155 ~ 27688671 (+)
G384972 NA non-coding upstream 177748 27548734 ~ 27678932 (+)
G384917 NA non-coding upstream 372124 27484354 ~ 27484556 (+)
G384773 NA non-coding upstream 485333 27370929 ~ 27371347 (+)
G384770 NA non-coding upstream 487987 27368457 ~ 27368693 (+)
G385144 NA non-coding downstream 6403 27863290 ~ 27891266 (+)
G385172 LOC106566130 non-coding downstream 48158 27905045 ~ 27905332 (+)
G385182 NA non-coding downstream 63167 27920054 ~ 27920350 (+)
G385498 NA non-coding downstream 103317 27960204 ~ 27960582 (+)
G385499 NA non-coding downstream 104129 27961016 ~ 27961215 (+)
G385053 NA other upstream 149602 27706714 ~ 27707078 (+)
G383794 LOC106566282 other upstream 1193067 26661838 ~ 26663613 (+)
LOC110522865 LOC106567246 other upstream 1395984 26437517 ~ 26502284 (+)
LOC110523503 NA other upstream 1669990 26174884 ~ 26186710 (+)
G385171 LOC106566130 other downstream 47580 27904467 ~ 27904731 (+)
G385805 NA other downstream 559718 28416605 ~ 28417555 (+)
spag8 LOC106566715 other downstream 1069390 28926263 ~ 28931410 (+)
tbx5a LOC106566939 other downstream 1884913 29741800 ~ 29763439 (+)
G387516 NA other downstream 2040099 29896986 ~ 29898134 (+)

Expression


Co-expression Network