G385171 (LOC106566130)


Basic Information

Item Value
gene id G385171
gene name LOC106566130
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 27904467 ~ 27904731 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU437511
AGGGTGAAGATCTGTACAGGTGACAGGATGGAGAGAGCCAGGAAAGTGGAGACTATCTCCCTCTGTCTGATTGGTCTAGAGGGCACCATCACCACAAAGTTACTGTCCAGCCTCAGCTCCGGCATGGGCTGGAACAGACGCACGCTCCCAATGCGCTGCATGGGTGTGGGACCCGAGAAGTACCCCATGGGCCCCTGGTGCTCTGTGCGCATGGAACTGCCTTTCCTTGAGTCCTCTGAGCTGCACTCCCCAGTCTCCGTGGACT

Function

NR:

description
transmembrane protein 132D-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU437511 True 265 TUCP 0.58 1 27904467 27904731

Neighbor

gene id symbol gene type direction distance location
LOC118964522 NA coding upstream 163378 27735878 ~ 27741089 (+)
LOC110522888 LOC106566402 coding upstream 185302 27675352 ~ 27719165 (+)
LOC110523527 LOC106567169 coding upstream 240433 27659144 ~ 27664034 (+)
LOC110523526 LOC106566370 coding upstream 247161 27585605 ~ 27657306 (+)
LOC118964580 LOC108247247 coding upstream 290653 27611757 ~ 27613814 (+)
LOC110523528 nsma3 coding downstream 77914 27982645 ~ 27994423 (+)
si:ch211-222n4.2 LOC106566406 coding downstream 103342 28008073 ~ 28016052 (+)
LOC110523531 LOC106566436 coding downstream 147890 28052621 ~ 28067973 (+)
LOC110523534 LOC106566461 coding downstream 205091 28109822 ~ 28112779 (+)
ftsj1 LOC106566467 coding downstream 323282 28228013 ~ 28235500 (+)
G385144 NA non-coding upstream 13201 27863290 ~ 27891266 (+)
G385139 NA non-coding upstream 47580 27856680 ~ 27856887 (+)
G385044 NA non-coding upstream 215796 27688155 ~ 27688671 (+)
G384972 NA non-coding upstream 225535 27548734 ~ 27678932 (+)
G384917 NA non-coding upstream 419911 27484354 ~ 27484556 (+)
G385172 LOC106566130 non-coding downstream 314 27905045 ~ 27905332 (+)
G385182 NA non-coding downstream 15323 27920054 ~ 27920350 (+)
G385498 NA non-coding downstream 55473 27960204 ~ 27960582 (+)
G385499 NA non-coding downstream 56285 27961016 ~ 27961215 (+)
G385510 NA non-coding downstream 68258 27972989 ~ 27973303 (+)
G385053 NA other upstream 197389 27706714 ~ 27707078 (+)
G383794 LOC106566282 other upstream 1240854 26661838 ~ 26663613 (+)
LOC110522865 LOC106567246 other upstream 1443771 26437517 ~ 26502284 (+)
LOC110523503 NA other upstream 1717777 26174884 ~ 26186710 (+)
G385805 NA other downstream 511874 28416605 ~ 28417555 (+)
spag8 LOC106566715 other downstream 1021546 28926263 ~ 28931410 (+)
tbx5a LOC106566939 other downstream 1837069 29741800 ~ 29763439 (+)
G387516 NA other downstream 1992255 29896986 ~ 29898134 (+)
G388019 NA other downstream 2382220 30286951 ~ 30287824 (+)

Expression


Co-expression Network