G385499


Basic Information

Item Value
gene id G385499
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 27961016 ~ 27961215 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU437860
cttaagtttgttgtcctgttgaaaggtgaaacttcaccccagtctgaggatctgagtgctctggagcaggttttcatcaaggatctctttatactttgctccgttcatctttccctcgatcctgactagtctcccagtccctgccgctgaaaaacatccccacagcatgattctgccaccaccatgcttcaccgtaggaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU437860 True 200 lncRNA 0.49 1 27961016 27961215

Neighbor

gene id symbol gene type direction distance location
LOC118964522 NA coding upstream 219927 27735878 ~ 27741089 (+)
LOC110522888 LOC106566402 coding upstream 241851 27675352 ~ 27719165 (+)
LOC110523527 LOC106567169 coding upstream 296982 27659144 ~ 27664034 (+)
LOC110523526 LOC106566370 coding upstream 303710 27585605 ~ 27657306 (+)
LOC110523528 nsma3 coding downstream 21430 27982645 ~ 27994423 (+)
si:ch211-222n4.2 LOC106566406 coding downstream 46858 28008073 ~ 28016052 (+)
LOC110523531 LOC106566436 coding downstream 91406 28052621 ~ 28067973 (+)
LOC110523534 LOC106566461 coding downstream 148607 28109822 ~ 28112779 (+)
ftsj1 LOC106566467 coding downstream 266798 28228013 ~ 28235500 (+)
G385498 NA non-coding upstream 434 27960204 ~ 27960582 (+)
G385182 NA non-coding upstream 40666 27920054 ~ 27920350 (+)
G385172 LOC106566130 non-coding upstream 55684 27905045 ~ 27905332 (+)
G385144 NA non-coding upstream 69750 27863290 ~ 27891266 (+)
G385139 NA non-coding upstream 104129 27856680 ~ 27856887 (+)
G385510 NA non-coding downstream 11774 27972989 ~ 27973303 (+)
G385512 NA non-coding downstream 12352 27973567 ~ 27973783 (+)
G385531 NA non-coding downstream 24241 27985456 ~ 27986156 (+)
G385543 NA non-coding downstream 128456 28089671 ~ 28093373 (+)
G385590 NA non-coding downstream 142013 28103228 ~ 28103605 (+)
G385171 LOC106566130 other upstream 56285 27904467 ~ 27904731 (+)
G385053 NA other upstream 253938 27706714 ~ 27707078 (+)
G383794 LOC106566282 other upstream 1297403 26661838 ~ 26663613 (+)
LOC110522865 LOC106567246 other upstream 1500320 26437517 ~ 26502284 (+)
G385805 NA other downstream 455390 28416605 ~ 28417555 (+)
spag8 LOC106566715 other downstream 965062 28926263 ~ 28931410 (+)
tbx5a LOC106566939 other downstream 1780585 29741800 ~ 29763439 (+)
G387516 NA other downstream 1935771 29896986 ~ 29898134 (+)
G388019 NA other downstream 2325736 30286951 ~ 30287824 (+)

Expression


Co-expression Network