G386022


Basic Information

Item Value
gene id G386022
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 28682750 ~ 28683207 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU438441
gtttctctccagtatgTAAAGTCATATGACCTTTGAGACTGGTTGAAAGACAAAAACGTTTGTGACATATGCTACAACCAAAACATTTTACTCCGATATGGATGGTCAGATGATCGCCGAGTGCGTGCACATGAGAAACATTTCTCACATACACTACAGGCAAAAGCTTTTTCTAGACTAACATGGCCTTTTCTAATGTGGGAGGTCATATGTTTTTGGAAATTGGTTACATCCCTGAAACCTTTAGTACATACATCACAGCTATAAGCCTTTGCTCTATGAGTTGTTCTCTGATGACTGGCTAAGGATGAAGATGAACAGAAAAGCTTGCCACAGGTTTCACAGCAATACTTCTTCTCCCGAGTGCTCTGCCTTATGACGTTTCCATATTGGCCATGACCGAAAGGTTTTTGGACACAAAGAGCAGATGTATGCCTTTTCCGGGTGATCACTGAAGT

Function

NR:

description
PREDICTED: zinc finger protein 264-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU438441 True 458 lncRNA 0.41 1 28682750 28683207

Neighbor

gene id symbol gene type direction distance location
LOC110523549 LOC106567216 coding upstream 199365 28481432 ~ 28483385 (+)
LOC110522905 LOC106563371 coding upstream 207212 28473547 ~ 28475595 (+)
LOC110523547 ccdc152 coding upstream 215616 28464099 ~ 28467134 (+)
ghr1 ghr1 coding upstream 218801 28439078 ~ 28463949 (+)
rgs7bpb LOC106566593 coding upstream 258803 28418222 ~ 28423947 (+)
pip5k1ba LOC106566653 coding downstream 37070 28720277 ~ 28733042 (+)
LOC110523554 LOC106566671 coding downstream 54254 28737461 ~ 28780731 (+)
LOC110523556 LOC106566689 coding downstream 113241 28796448 ~ 28804711 (+)
smc5 smc5 coding downstream 122019 28805226 ~ 28829428 (+)
zfand5b zfand5b coding downstream 146508 28829715 ~ 28837189 (+)
G386017 NA non-coding upstream 12700 28669715 ~ 28670050 (+)
G386018 NA non-coding upstream 14913 28667460 ~ 28667837 (+)
G385973 NA non-coding upstream 23890 28658572 ~ 28658860 (+)
G385946 NA non-coding upstream 122138 28560247 ~ 28560612 (+)
G385933 NA non-coding upstream 143693 28536339 ~ 28539057 (+)
G386024 NA non-coding downstream 1535 28684742 ~ 28685014 (+)
G386044 NA non-coding downstream 21971 28705178 ~ 28705512 (+)
G386057 NA non-coding downstream 35595 28718802 ~ 28719022 (+)
G386065 NA non-coding downstream 73303 28756510 ~ 28770567 (+)
G386445 NA non-coding downstream 169673 28852880 ~ 28853151 (+)
G385805 NA other upstream 265195 28416605 ~ 28417555 (+)
G385171 LOC106566130 other upstream 778019 27904467 ~ 27904731 (+)
G385053 NA other upstream 975672 27706714 ~ 27707078 (+)
LOC110522888 LOC106566402 other upstream 999357 27675352 ~ 27719165 (+)
G383794 LOC106566282 other upstream 2019137 26661838 ~ 26663613 (+)
spag8 LOC106566715 other downstream 243070 28926263 ~ 28931410 (+)
tbx5a LOC106566939 other downstream 1058593 29741800 ~ 29763439 (+)
G387516 NA other downstream 1213779 29896986 ~ 29898134 (+)
G388019 NA other downstream 1603744 30286951 ~ 30287824 (+)
G390184 NA other downstream 3277148 31960355 ~ 31960745 (+)

Expression


Co-expression Network