Gene
RNA
| Item | Value |
|---|---|
| gene id | G386057 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 28718802 ~ 28719022 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU438477 | True | 221 | lncRNA | 0.45 | 1 | 28718802 | 28719022 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523549 | LOC106567216 | coding | upstream | 235417 | 28481432 ~ 28483385 (+) |
| LOC110522905 | LOC106563371 | coding | upstream | 243264 | 28473547 ~ 28475595 (+) |
| LOC110523547 | ccdc152 | coding | upstream | 251668 | 28464099 ~ 28467134 (+) |
| ghr1 | ghr1 | coding | upstream | 254853 | 28439078 ~ 28463949 (+) |
| rgs7bpb | LOC106566593 | coding | upstream | 294855 | 28418222 ~ 28423947 (+) |
| pip5k1ba | LOC106566653 | coding | downstream | 1255 | 28720277 ~ 28733042 (+) |
| LOC110523554 | LOC106566671 | coding | downstream | 18439 | 28737461 ~ 28780731 (+) |
| LOC110523556 | LOC106566689 | coding | downstream | 77426 | 28796448 ~ 28804711 (+) |
| smc5 | smc5 | coding | downstream | 86204 | 28805226 ~ 28829428 (+) |
| zfand5b | zfand5b | coding | downstream | 110693 | 28829715 ~ 28837189 (+) |
| G386044 | NA | non-coding | upstream | 13290 | 28705178 ~ 28705512 (+) |
| G386024 | NA | non-coding | upstream | 33788 | 28684742 ~ 28685014 (+) |
| G386022 | NA | non-coding | upstream | 35595 | 28682750 ~ 28683207 (+) |
| G386017 | NA | non-coding | upstream | 48752 | 28669715 ~ 28670050 (+) |
| G386018 | NA | non-coding | upstream | 50965 | 28667460 ~ 28667837 (+) |
| G386065 | NA | non-coding | downstream | 37488 | 28756510 ~ 28770567 (+) |
| G386445 | NA | non-coding | downstream | 133858 | 28852880 ~ 28853151 (+) |
| spag8 | LOC106566715 | non-coding | downstream | 208794 | 28926263 ~ 28931410 (+) |
| G386537 | NA | non-coding | downstream | 242795 | 28961817 ~ 28965648 (+) |
| G386568 | LOC106566731 | non-coding | downstream | 275123 | 28994145 ~ 28995123 (+) |
| G385805 | NA | other | upstream | 301247 | 28416605 ~ 28417555 (+) |
| G385171 | LOC106566130 | other | upstream | 814071 | 27904467 ~ 27904731 (+) |
| G385053 | NA | other | upstream | 1011724 | 27706714 ~ 27707078 (+) |
| LOC110522888 | LOC106566402 | other | upstream | 1035409 | 27675352 ~ 27719165 (+) |
| G383794 | LOC106566282 | other | upstream | 2055189 | 26661838 ~ 26663613 (+) |
| tbx5a | LOC106566939 | other | downstream | 1022778 | 29741800 ~ 29763439 (+) |
| G387516 | NA | other | downstream | 1177964 | 29896986 ~ 29898134 (+) |
| G388019 | NA | other | downstream | 1567929 | 30286951 ~ 30287824 (+) |
| G390184 | NA | other | downstream | 3241333 | 31960355 ~ 31960745 (+) |
