G386445


Basic Information

Item Value
gene id G386445
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 28852880 ~ 28853151 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU438898
tattgtctgtgagtgccacagaactaatgctccagacgaaaccaagatgaaatttcatacaggaagtaccccagattttgaatgcgctgtgttccaatgtctccttatatggctgtgaatgcgccaggaatgagcctacactttctgtcgtttccccaaggtgtctgcagcattgtgacgtatttgtaggcatatcattggaagattgaccataagagactacatttaccaggtgcccgcatggtgtcctccgtcgaaattattgcgtaatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU438898 True 272 lncRNA 0.45 1 28852880 28853151

Neighbor

gene id symbol gene type direction distance location
zfand5b zfand5b coding upstream 15691 28829715 ~ 28837189 (+)
smc5 smc5 coding upstream 23452 28805226 ~ 28829428 (+)
LOC110523556 LOC106566689 coding upstream 48169 28796448 ~ 28804711 (+)
LOC110523554 LOC106566671 coding upstream 72149 28737461 ~ 28780731 (+)
pip5k1ba LOC106566653 coding upstream 119838 28720277 ~ 28733042 (+)
LOC110523559 LOC106566708 coding downstream 23422 28876573 ~ 28880143 (+)
spag8 LOC106566715 coding downstream 73112 28926263 ~ 28931410 (+)
ssna1 ssna1 coding downstream 151616 29004767 ~ 29009110 (+)
alad hem2 coding downstream 191952 29045103 ~ 29055942 (+)
LOC110522906 LOC106563306 coding downstream 208124 29061275 ~ 29067123 (+)
G386065 NA non-coding upstream 82313 28756510 ~ 28770567 (+)
G386057 NA non-coding upstream 133858 28718802 ~ 28719022 (+)
G386044 NA non-coding upstream 147368 28705178 ~ 28705512 (+)
G386024 NA non-coding upstream 167866 28684742 ~ 28685014 (+)
G386022 NA non-coding upstream 169673 28682750 ~ 28683207 (+)
G386537 NA non-coding downstream 108666 28961817 ~ 28965648 (+)
G386568 LOC106566731 non-coding downstream 140994 28994145 ~ 28995123 (+)
G386606 NA non-coding downstream 217661 29070812 ~ 29073163 (+)
LOC110523576 LOC106563296 non-coding downstream 321197 29174319 ~ 29187968 (+)
G385805 NA other upstream 435325 28416605 ~ 28417555 (+)
G385171 LOC106566130 other upstream 948149 27904467 ~ 27904731 (+)
G385053 NA other upstream 1145802 27706714 ~ 27707078 (+)
LOC110522888 LOC106566402 other upstream 1169487 27675352 ~ 27719165 (+)
G383794 LOC106566282 other upstream 2189267 26661838 ~ 26663613 (+)
tbx5a LOC106566939 other downstream 888649 29741800 ~ 29763439 (+)
G387516 NA other downstream 1043835 29896986 ~ 29898134 (+)
G388019 NA other downstream 1433800 30286951 ~ 30287824 (+)
G390184 NA other downstream 3107204 31960355 ~ 31960745 (+)

Expression


Co-expression Network