G386537


Basic Information

Item Value
gene id G386537
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 28961817 ~ 28965648 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU438991
ttgtaggctactgTCCAAGCTATGTATTCCAATGGTGcaactgctgtcggcatccaaagattatccaatttgaataaacgcttggaggtaaggatgacagcagtggtgtagtctacagcgatacggatatcacttattattgatatcttcatagcgcattgatgtgaatcacactgctgctctctcatttatgtatttgcgccttacggattgtggttgttgtggatggctgttcacaaatctaaatgtgtatttgaacccaataaaggttgaattcaagaagtttaagctgcctatcaatgtcacaccctggtcgaagtattttgtgtttatctttagttatttggttaggccagggtgtggcatgggtttttgtaggtggtgtgtatgta

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU438991 True 392 lncRNA 0.41 2 28961817 28965648

Neighbor

gene id symbol gene type direction distance location
spag8 LOC106566715 coding upstream 30407 28926263 ~ 28931410 (+)
LOC110523559 LOC106566708 coding upstream 81674 28876573 ~ 28880143 (+)
zfand5b zfand5b coding upstream 124628 28829715 ~ 28837189 (+)
smc5 smc5 coding upstream 132389 28805226 ~ 28829428 (+)
LOC110523556 LOC106566689 coding upstream 157106 28796448 ~ 28804711 (+)
ssna1 ssna1 coding downstream 39119 29004767 ~ 29009110 (+)
alad hem2 coding downstream 79455 29045103 ~ 29055942 (+)
LOC110522906 LOC106563306 coding downstream 95627 29061275 ~ 29067123 (+)
coq4 coq4 coding downstream 123877 29089525 ~ 29097342 (+)
LOC110523572 zmynd19 coding downstream 150843 29116491 ~ 29121227 (+)
G386445 NA non-coding upstream 108666 28852880 ~ 28853151 (+)
G386065 NA non-coding upstream 191250 28756510 ~ 28770567 (+)
G386057 NA non-coding upstream 242795 28718802 ~ 28719022 (+)
G386044 NA non-coding upstream 256305 28705178 ~ 28705512 (+)
G386568 LOC106566731 non-coding downstream 28497 28994145 ~ 28995123 (+)
G386606 NA non-coding downstream 105164 29070812 ~ 29073163 (+)
LOC110523576 LOC106563296 non-coding downstream 208700 29174319 ~ 29187968 (+)
G386814 NA non-coding downstream 231239 29196887 ~ 29197098 (+)
G386815 NA non-coding downstream 231483 29197131 ~ 29197363 (+)
G385805 NA other upstream 544262 28416605 ~ 28417555 (+)
G385171 LOC106566130 other upstream 1057086 27904467 ~ 27904731 (+)
G385053 NA other upstream 1254739 27706714 ~ 27707078 (+)
LOC110522888 LOC106566402 other upstream 1278424 27675352 ~ 27719165 (+)
tbx5a LOC106566939 other downstream 776152 29741800 ~ 29763439 (+)
G387516 NA other downstream 931338 29896986 ~ 29898134 (+)
G388019 NA other downstream 1321303 30286951 ~ 30287824 (+)
G390184 NA other downstream 2994707 31960355 ~ 31960745 (+)
G390393 NA other downstream 3254533 32220181 ~ 32220533 (+)

Expression


Co-expression Network