G386814


Basic Information

Item Value
gene id G386814
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 29196887 ~ 29197098 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU439304
gtacacaaacaacaagtgcgaagttaaaattggcaaaaaacacacatttctttccacagggccatggggtgagacaggaatgcagcttaagccccaccctcttcaacatatatatcaacaaattggtgagggcactagaacagtctgcagcacccagcctcaccctactagaatttGAAGTAAAATGtatactgtttgctgatgatctggtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU439304 True 212 lncRNA 0.43 1 29196887 29197098

Neighbor

gene id symbol gene type direction distance location
LOC110523576 LOC106563296 coding upstream 8919 29174319 ~ 29187968 (+)
LOC110523574 LOC106566787 coding upstream 30377 29140833 ~ 29166510 (+)
tmem141 tmem141 coding upstream 61404 29133844 ~ 29135483 (+)
LOC110523572 zmynd19 coding upstream 75660 29116491 ~ 29121227 (+)
coq4 coq4 coding upstream 99545 29089525 ~ 29097342 (+)
LOC110523578 LOC106566868 coding downstream 57540 29254638 ~ 29262641 (+)
mtfp1 LOC106566934 coding downstream 107239 29304337 ~ 29312328 (+)
LOC110523581 LOC106566935 coding downstream 144180 29341278 ~ 29446180 (+)
LOC110523583 LOC106566936 coding downstream 515830 29712928 ~ 30103090 (+)
tbx5a LOC106566939 coding downstream 544765 29741800 ~ 29763439 (+)
G386606 NA non-coding upstream 123724 29070812 ~ 29073163 (+)
G386568 LOC106566731 non-coding upstream 201764 28994145 ~ 28995123 (+)
G386537 NA non-coding upstream 231239 28961817 ~ 28965648 (+)
spag8 LOC106566715 non-coding upstream 265956 28926263 ~ 28931410 (+)
G386815 NA non-coding downstream 33 29197131 ~ 29197363 (+)
G386846 NA non-coding downstream 79703 29276801 ~ 29277657 (+)
G386918 NA non-coding downstream 98080 29295178 ~ 29295389 (+)
G386959 NA non-coding downstream 167614 29364712 ~ 29364984 (+)
G386962 NA non-coding downstream 170459 29367557 ~ 29367678 (+)
G385805 NA other upstream 779332 28416605 ~ 28417555 (+)
G385171 LOC106566130 other upstream 1292156 27904467 ~ 27904731 (+)
G385053 NA other upstream 1489809 27706714 ~ 27707078 (+)
LOC110522888 LOC106566402 other upstream 1513494 27675352 ~ 27719165 (+)
G387516 NA other downstream 699888 29896986 ~ 29898134 (+)
G388019 NA other downstream 1089853 30286951 ~ 30287824 (+)
G390184 NA other downstream 2763257 31960355 ~ 31960745 (+)
G390393 NA other downstream 3023083 32220181 ~ 32220533 (+)

Expression


Co-expression Network