G386846


Basic Information

Item Value
gene id G386846
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 29276801 ~ 29277657 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU439344
cccactgtcaaacatggcggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaactacaaagtattaacttaagggggctgaacaattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaaaggggccgaatactttcgcaaggcactgtatatagtgttgagtcattcacATACTTAGACACTGGCTTTCCTCAAAGCAAGTGGCaattcattagtaaagattgaaaaaagtaatgggCCTCAACAGCTGCCAaagggaattcctgattctacctggattatgttggagaggcttccattaaataacaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU439344 True 471 lncRNA 0.39 2 29276801 29277657

Neighbor

gene id symbol gene type direction distance location
LOC110523578 LOC106566868 coding upstream 14160 29254638 ~ 29262641 (+)
LOC110523576 LOC106563296 coding upstream 88833 29174319 ~ 29187968 (+)
LOC110523574 LOC106566787 coding upstream 110291 29140833 ~ 29166510 (+)
tmem141 tmem141 coding upstream 141318 29133844 ~ 29135483 (+)
LOC110523572 zmynd19 coding upstream 155574 29116491 ~ 29121227 (+)
mtfp1 LOC106566934 coding downstream 26680 29304337 ~ 29312328 (+)
LOC110523581 LOC106566935 coding downstream 63621 29341278 ~ 29446180 (+)
LOC110523583 LOC106566936 coding downstream 435271 29712928 ~ 30103090 (+)
tbx5a LOC106566939 coding downstream 464206 29741800 ~ 29763439 (+)
LOC110523590 rab14 coding downstream 581952 29859609 ~ 29902923 (+)
G386815 NA non-coding upstream 79438 29197131 ~ 29197363 (+)
G386814 NA non-coding upstream 79703 29196887 ~ 29197098 (+)
G386606 NA non-coding upstream 203638 29070812 ~ 29073163 (+)
G386568 LOC106566731 non-coding upstream 281678 28994145 ~ 28995123 (+)
G386918 NA non-coding downstream 17521 29295178 ~ 29295389 (+)
G386959 NA non-coding downstream 87055 29364712 ~ 29364984 (+)
G386962 NA non-coding downstream 89900 29367557 ~ 29367678 (+)
G386964 NA non-coding downstream 99423 29377080 ~ 29377290 (+)
G386965 NA non-coding downstream 100037 29377694 ~ 29377939 (+)
spag8 LOC106566715 other upstream 345870 28926263 ~ 28931410 (+)
G385805 NA other upstream 859246 28416605 ~ 28417555 (+)
G385171 LOC106566130 other upstream 1372070 27904467 ~ 27904731 (+)
G385053 NA other upstream 1569723 27706714 ~ 27707078 (+)
LOC110522888 LOC106566402 other upstream 1593408 27675352 ~ 27719165 (+)
G387516 NA other downstream 619329 29896986 ~ 29898134 (+)
G388019 NA other downstream 1009294 30286951 ~ 30287824 (+)
G390184 NA other downstream 2682698 31960355 ~ 31960745 (+)
G390393 NA other downstream 2942524 32220181 ~ 32220533 (+)

Expression


Co-expression Network