G386964


Basic Information

Item Value
gene id G386964
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 29377080 ~ 29377290 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU439475
agggaggaggggggagagagaagagaaaagcagGGAGTGAAAAGAGCAGGACAAGTGGAGGAAAAACAGCCTCAGTGATGTTTATTTGTACGTGAATTTACGAGGAGGGACTGAGTGTTTCTgattttctccccctcctctcgcAGGCTGCACAGGCATGGTCTGTGACCCCATGActcagagttgtgtgtgtgtgtgtgtgagagagaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU439475 True 211 lncRNA 0.51 1 29377080 29377290

Neighbor

gene id symbol gene type direction distance location
mtfp1 LOC106566934 coding upstream 64752 29304337 ~ 29312328 (+)
LOC110523578 LOC106566868 coding upstream 114439 29254638 ~ 29262641 (+)
LOC110523576 LOC106563296 coding upstream 189112 29174319 ~ 29187968 (+)
LOC110523574 LOC106566787 coding upstream 210570 29140833 ~ 29166510 (+)
tmem141 tmem141 coding upstream 241597 29133844 ~ 29135483 (+)
LOC110523583 LOC106566936 coding downstream 335638 29712928 ~ 30103090 (+)
tbx5a LOC106566939 coding downstream 364573 29741800 ~ 29763439 (+)
LOC110523590 rab14 coding downstream 482319 29859609 ~ 29902923 (+)
LOC110524747 LOC106567126 coding downstream 728003 30105293 ~ 30112442 (+)
LOC110524742 LOC106567059 coding downstream 756382 30133672 ~ 30217715 (+)
G386962 NA non-coding upstream 9402 29367557 ~ 29367678 (+)
G386959 NA non-coding upstream 12096 29364712 ~ 29364984 (+)
G386918 NA non-coding upstream 81691 29295178 ~ 29295389 (+)
G386846 NA non-coding upstream 99423 29276801 ~ 29277657 (+)
G386815 NA non-coding upstream 179717 29197131 ~ 29197363 (+)
G386965 NA non-coding downstream 404 29377694 ~ 29377939 (+)
G386973 NA non-coding downstream 9980 29387270 ~ 29387475 (+)
G386974 NA non-coding downstream 11761 29389051 ~ 29389363 (+)
G386975 NA non-coding downstream 12548 29389838 ~ 29390115 (+)
G386976 NA non-coding downstream 13010 29390300 ~ 29390603 (+)
spag8 LOC106566715 other upstream 446149 28926263 ~ 28931410 (+)
G385805 NA other upstream 959525 28416605 ~ 28417555 (+)
G385171 LOC106566130 other upstream 1472349 27904467 ~ 27904731 (+)
G385053 NA other upstream 1670002 27706714 ~ 27707078 (+)
LOC110522888 LOC106566402 other upstream 1693687 27675352 ~ 27719165 (+)
G387516 NA other downstream 519696 29896986 ~ 29898134 (+)
G388019 NA other downstream 909661 30286951 ~ 30287824 (+)
G390184 NA other downstream 2583065 31960355 ~ 31960745 (+)
G390393 NA other downstream 2842891 32220181 ~ 32220533 (+)

Expression


Co-expression Network