Gene
RNA
| Item | Value |
|---|---|
| gene id | G386974 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 29389051 ~ 29389363 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU439485 | True | 313 | lncRNA | 0.45 | 1 | 29389051 | 29389363 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mtfp1 | LOC106566934 | coding | upstream | 76723 | 29304337 ~ 29312328 (+) |
| LOC110523578 | LOC106566868 | coding | upstream | 126410 | 29254638 ~ 29262641 (+) |
| LOC110523576 | LOC106563296 | coding | upstream | 201083 | 29174319 ~ 29187968 (+) |
| LOC110523574 | LOC106566787 | coding | upstream | 222541 | 29140833 ~ 29166510 (+) |
| tmem141 | tmem141 | coding | upstream | 253568 | 29133844 ~ 29135483 (+) |
| LOC110523583 | LOC106566936 | coding | downstream | 323565 | 29712928 ~ 30103090 (+) |
| tbx5a | LOC106566939 | coding | downstream | 352500 | 29741800 ~ 29763439 (+) |
| LOC110523590 | rab14 | coding | downstream | 470246 | 29859609 ~ 29902923 (+) |
| LOC110524747 | LOC106567126 | coding | downstream | 715930 | 30105293 ~ 30112442 (+) |
| LOC110524742 | LOC106567059 | coding | downstream | 744309 | 30133672 ~ 30217715 (+) |
| G386973 | NA | non-coding | upstream | 1576 | 29387270 ~ 29387475 (+) |
| G386965 | NA | non-coding | upstream | 11112 | 29377694 ~ 29377939 (+) |
| G386964 | NA | non-coding | upstream | 11761 | 29377080 ~ 29377290 (+) |
| G386962 | NA | non-coding | upstream | 21373 | 29367557 ~ 29367678 (+) |
| G386959 | NA | non-coding | upstream | 24067 | 29364712 ~ 29364984 (+) |
| G386975 | NA | non-coding | downstream | 475 | 29389838 ~ 29390115 (+) |
| G386976 | NA | non-coding | downstream | 937 | 29390300 ~ 29390603 (+) |
| G386978 | NA | non-coding | downstream | 8289 | 29397652 ~ 29398086 (+) |
| G386980 | NA | non-coding | downstream | 10251 | 29399614 ~ 29399843 (+) |
| G386981 | NA | non-coding | downstream | 10668 | 29400031 ~ 29400296 (+) |
| spag8 | LOC106566715 | other | upstream | 458120 | 28926263 ~ 28931410 (+) |
| G385805 | NA | other | upstream | 971496 | 28416605 ~ 28417555 (+) |
| G385171 | LOC106566130 | other | upstream | 1484320 | 27904467 ~ 27904731 (+) |
| G385053 | NA | other | upstream | 1681973 | 27706714 ~ 27707078 (+) |
| LOC110522888 | LOC106566402 | other | upstream | 1705658 | 27675352 ~ 27719165 (+) |
| G387516 | NA | other | downstream | 507623 | 29896986 ~ 29898134 (+) |
| G388019 | NA | other | downstream | 897588 | 30286951 ~ 30287824 (+) |
| G390184 | NA | other | downstream | 2570992 | 31960355 ~ 31960745 (+) |
| G390393 | NA | other | downstream | 2830818 | 32220181 ~ 32220533 (+) |
