G386986


Basic Information

Item Value
gene id G386986
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 29408799 ~ 29409022 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU439497
gattaaaacattcccaaaccagaaaccgtggattgatggcagcattcacgcgaaactgaaagcgcgaaccactgcttttaaccagggcaaggtgaccggaaacatgaccggtgtagctattccctccgcaaggcaatcaaacaagctaagcgtcagtatagagacaaagtagagccgcaattcaacggctcagacacaagaggtatgtggcaaggtctacagtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU439497 True 224 lncRNA 0.49 1 29408799 29409022

Neighbor

gene id symbol gene type direction distance location
mtfp1 LOC106566934 coding upstream 96471 29304337 ~ 29312328 (+)
LOC110523578 LOC106566868 coding upstream 146158 29254638 ~ 29262641 (+)
LOC110523576 LOC106563296 coding upstream 220831 29174319 ~ 29187968 (+)
LOC110523574 LOC106566787 coding upstream 242289 29140833 ~ 29166510 (+)
tmem141 tmem141 coding upstream 273316 29133844 ~ 29135483 (+)
LOC110523583 LOC106566936 coding downstream 303906 29712928 ~ 30103090 (+)
tbx5a LOC106566939 coding downstream 332841 29741800 ~ 29763439 (+)
LOC110523590 rab14 coding downstream 450587 29859609 ~ 29902923 (+)
LOC110524747 LOC106567126 coding downstream 696271 30105293 ~ 30112442 (+)
LOC110524742 LOC106567059 coding downstream 724650 30133672 ~ 30217715 (+)
G386982 NA non-coding upstream 8047 29400530 ~ 29400752 (+)
G386981 NA non-coding upstream 8503 29400031 ~ 29400296 (+)
G386980 NA non-coding upstream 8956 29399614 ~ 29399843 (+)
G386978 NA non-coding upstream 10713 29397652 ~ 29398086 (+)
G386976 NA non-coding upstream 18196 29390300 ~ 29390603 (+)
G386987 NA non-coding downstream 913 29409935 ~ 29410157 (+)
G386990 NA non-coding downstream 4195 29413217 ~ 29413469 (+)
G386995 NA non-coding downstream 7447 29416469 ~ 29416702 (+)
G386998 NA non-coding downstream 9856 29418878 ~ 29419144 (+)
LOC110523581 LOC106566935 non-coding downstream 36397 29341278 ~ 29446180 (+)
spag8 LOC106566715 other upstream 477868 28926263 ~ 28931410 (+)
G385805 NA other upstream 991244 28416605 ~ 28417555 (+)
G385171 LOC106566130 other upstream 1504068 27904467 ~ 27904731 (+)
G385053 NA other upstream 1701721 27706714 ~ 27707078 (+)
LOC110522888 LOC106566402 other upstream 1725406 27675352 ~ 27719165 (+)
G387516 NA other downstream 487964 29896986 ~ 29898134 (+)
G388019 NA other downstream 877929 30286951 ~ 30287824 (+)
G390184 NA other downstream 2551333 31960355 ~ 31960745 (+)
G390393 NA other downstream 2811159 32220181 ~ 32220533 (+)

Expression


Co-expression Network