G386987


Basic Information

Item Value
gene id G386987
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 29409935 ~ 29410157 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU439498
ggcccttcggagtgtggtgtcaggaaaataacctcacactcaacgtcaacaaaacaaaggagatgattgtgatcttcaggaaacagcagagggagaacccccctatccacagtttccatctctcacagttgaagtgtacctatgataaaaatgacagacctctacatgctttgtaagtaggaaaacctgcaaaatcgtcagtgtatcaaatacttgttctccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU439498 True 223 lncRNA 0.43 1 29409935 29410157

Neighbor

gene id symbol gene type direction distance location
mtfp1 LOC106566934 coding upstream 97607 29304337 ~ 29312328 (+)
LOC110523578 LOC106566868 coding upstream 147294 29254638 ~ 29262641 (+)
LOC110523576 LOC106563296 coding upstream 221967 29174319 ~ 29187968 (+)
LOC110523574 LOC106566787 coding upstream 243425 29140833 ~ 29166510 (+)
tmem141 tmem141 coding upstream 274452 29133844 ~ 29135483 (+)
LOC110523583 LOC106566936 coding downstream 302771 29712928 ~ 30103090 (+)
tbx5a LOC106566939 coding downstream 331706 29741800 ~ 29763439 (+)
LOC110523590 rab14 coding downstream 449452 29859609 ~ 29902923 (+)
LOC110524747 LOC106567126 coding downstream 695136 30105293 ~ 30112442 (+)
LOC110524742 LOC106567059 coding downstream 723515 30133672 ~ 30217715 (+)
G386986 NA non-coding upstream 913 29408799 ~ 29409022 (+)
G386982 NA non-coding upstream 9183 29400530 ~ 29400752 (+)
G386981 NA non-coding upstream 9639 29400031 ~ 29400296 (+)
G386980 NA non-coding upstream 10092 29399614 ~ 29399843 (+)
G386978 NA non-coding upstream 11849 29397652 ~ 29398086 (+)
G386990 NA non-coding downstream 3060 29413217 ~ 29413469 (+)
G386995 NA non-coding downstream 6312 29416469 ~ 29416702 (+)
G386998 NA non-coding downstream 8721 29418878 ~ 29419144 (+)
LOC110523581 LOC106566935 non-coding downstream 35262 29341278 ~ 29446180 (+)
G387138 NA non-coding downstream 67330 29477487 ~ 29477882 (+)
spag8 LOC106566715 other upstream 479004 28926263 ~ 28931410 (+)
G385805 NA other upstream 992380 28416605 ~ 28417555 (+)
G385171 LOC106566130 other upstream 1505204 27904467 ~ 27904731 (+)
G385053 NA other upstream 1702857 27706714 ~ 27707078 (+)
LOC110522888 LOC106566402 other upstream 1726542 27675352 ~ 27719165 (+)
G387516 NA other downstream 486829 29896986 ~ 29898134 (+)
G388019 NA other downstream 876794 30286951 ~ 30287824 (+)
G390184 NA other downstream 2550198 31960355 ~ 31960745 (+)
G390393 NA other downstream 2810024 32220181 ~ 32220533 (+)

Expression


Co-expression Network