Gene
RNA
| Item | Value |
|---|---|
| gene id | G386990 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 29413217 ~ 29413469 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC106676400 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU439501 | True | 253 | lncRNA | 0.44 | 1 | 29413217 | 29413469 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mtfp1 | LOC106566934 | coding | upstream | 100889 | 29304337 ~ 29312328 (+) |
| LOC110523578 | LOC106566868 | coding | upstream | 150576 | 29254638 ~ 29262641 (+) |
| LOC110523576 | LOC106563296 | coding | upstream | 225249 | 29174319 ~ 29187968 (+) |
| LOC110523574 | LOC106566787 | coding | upstream | 246707 | 29140833 ~ 29166510 (+) |
| tmem141 | tmem141 | coding | upstream | 277734 | 29133844 ~ 29135483 (+) |
| LOC110523583 | LOC106566936 | coding | downstream | 299459 | 29712928 ~ 30103090 (+) |
| tbx5a | LOC106566939 | coding | downstream | 328394 | 29741800 ~ 29763439 (+) |
| LOC110523590 | rab14 | coding | downstream | 446140 | 29859609 ~ 29902923 (+) |
| LOC110524747 | LOC106567126 | coding | downstream | 691824 | 30105293 ~ 30112442 (+) |
| LOC110524742 | LOC106567059 | coding | downstream | 720203 | 30133672 ~ 30217715 (+) |
| G386987 | NA | non-coding | upstream | 3060 | 29409935 ~ 29410157 (+) |
| G386986 | NA | non-coding | upstream | 4195 | 29408799 ~ 29409022 (+) |
| G386982 | NA | non-coding | upstream | 12465 | 29400530 ~ 29400752 (+) |
| G386981 | NA | non-coding | upstream | 12921 | 29400031 ~ 29400296 (+) |
| G386980 | NA | non-coding | upstream | 13374 | 29399614 ~ 29399843 (+) |
| G386995 | NA | non-coding | downstream | 3000 | 29416469 ~ 29416702 (+) |
| G386998 | NA | non-coding | downstream | 5409 | 29418878 ~ 29419144 (+) |
| LOC110523581 | LOC106566935 | non-coding | downstream | 31950 | 29341278 ~ 29446180 (+) |
| G387138 | NA | non-coding | downstream | 64018 | 29477487 ~ 29477882 (+) |
| G387150 | NA | non-coding | downstream | 72721 | 29486190 ~ 29486413 (+) |
| spag8 | LOC106566715 | other | upstream | 482286 | 28926263 ~ 28931410 (+) |
| G385805 | NA | other | upstream | 995662 | 28416605 ~ 28417555 (+) |
| G385171 | LOC106566130 | other | upstream | 1508486 | 27904467 ~ 27904731 (+) |
| G385053 | NA | other | upstream | 1706139 | 27706714 ~ 27707078 (+) |
| LOC110522888 | LOC106566402 | other | upstream | 1729824 | 27675352 ~ 27719165 (+) |
| G387516 | NA | other | downstream | 483517 | 29896986 ~ 29898134 (+) |
| G388019 | NA | other | downstream | 873482 | 30286951 ~ 30287824 (+) |
| G390184 | NA | other | downstream | 2546886 | 31960355 ~ 31960745 (+) |
| G390393 | NA | other | downstream | 2806712 | 32220181 ~ 32220533 (+) |
