G387484


Basic Information

Item Value
gene id G387484
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 29830848 ~ 29831142 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU440040
CTAGCTACAATAACATAAACATGAAATGGTTCTATTTTAGCAGCAACTTCGAAGTCCCCACCATCCGACTCGTCATGCTCCCGGTGGCCAATGTGTATATTTTTCTTCATCAGCTTCTTCTTTCTTTGAGCCATTGCGATAAGTTCTGCACCGTTAACTTGTTTAACTTTGTTCAACGCTTTGATacacagaaaGCAGGCATTTTGAAACAGGTGAGATTCTTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU440040 True 224 lncRNA 0.41 2 29830848 29831142

Neighbor

gene id symbol gene type direction distance location
tbx5a LOC106566939 coding upstream 67409 29741800 ~ 29763439 (+)
LOC110523583 LOC106566936 coding upstream 108160 29712928 ~ 30103090 (+)
LOC110523581 LOC106566935 coding upstream 384668 29341278 ~ 29446180 (+)
mtfp1 LOC106566934 coding upstream 518520 29304337 ~ 29312328 (+)
LOC110523578 LOC106566868 coding upstream 568207 29254638 ~ 29262641 (+)
LOC110523590 rab14 coding downstream 28467 29859609 ~ 29902923 (+)
LOC110524747 LOC106567126 coding downstream 274151 30105293 ~ 30112442 (+)
LOC110524742 LOC106567059 coding downstream 302530 30133672 ~ 30217715 (+)
LOC110523600 LOC106567149 coding downstream 425231 30256373 ~ 30260305 (+)
rgs3a LOC106565973 coding downstream 508664 30339806 ~ 30495960 (+)
G387406 NA non-coding upstream 118885 29711764 ~ 29711963 (+)
G387405 NA non-coding upstream 119139 29711303 ~ 29711709 (+)
G387401 NA non-coding upstream 124725 29705884 ~ 29706123 (+)
G387399 NA non-coding upstream 126895 29703734 ~ 29703953 (+)
G387395 NA non-coding upstream 135155 29695449 ~ 29695693 (+)
G387570 NA non-coding downstream 144237 29975379 ~ 29976702 (+)
G387556 LOC106566971 non-coding downstream 165336 29996478 ~ 30003512 (+)
G387597 NA non-coding downstream 201559 30032701 ~ 30077928 (+)
G387655 NA non-coding downstream 282597 30113739 ~ 30184969 (+)
spag8 LOC106566715 other upstream 899917 28926263 ~ 28931410 (+)
G385805 NA other upstream 1413293 28416605 ~ 28417555 (+)
G385171 LOC106566130 other upstream 1926117 27904467 ~ 27904731 (+)
G385053 NA other upstream 2123770 27706714 ~ 27707078 (+)
G387516 NA other downstream 65844 29896986 ~ 29898134 (+)
G388019 NA other downstream 455809 30286951 ~ 30287824 (+)
G390184 NA other downstream 2129213 31960355 ~ 31960745 (+)
G390393 NA other downstream 2389039 32220181 ~ 32220533 (+)
G391513 LOC100136561 other downstream 3327684 33158826 ~ 33162980 (+)

Expression


Co-expression Network