Gene
RNA
| Item | Value |
|---|---|
| gene id | G387516 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 29896986 ~ 29898134 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106576300 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU440079 | True | 1125 | TUCP | 0.57 | 2 | 29896986 | 29898134 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tbx5a | LOC106566939 | coding | upstream | 133547 | 29741800 ~ 29763439 (+) |
| LOC110523583 | LOC106566936 | coding | upstream | 174298 | 29712928 ~ 30103090 (+) |
| LOC110523581 | LOC106566935 | coding | upstream | 450806 | 29341278 ~ 29446180 (+) |
| mtfp1 | LOC106566934 | coding | upstream | 584658 | 29304337 ~ 29312328 (+) |
| LOC110523578 | LOC106566868 | coding | upstream | 634345 | 29254638 ~ 29262641 (+) |
| LOC110524747 | LOC106567126 | coding | downstream | 207159 | 30105293 ~ 30112442 (+) |
| LOC110524742 | LOC106567059 | coding | downstream | 235538 | 30133672 ~ 30217715 (+) |
| LOC110523600 | LOC106567149 | coding | downstream | 358239 | 30256373 ~ 30260305 (+) |
| rgs3a | LOC106565973 | coding | downstream | 441672 | 30339806 ~ 30495960 (+) |
| LOC110523597 | LOC106565929 | coding | downstream | 776802 | 30674936 ~ 30711660 (+) |
| G387484 | NA | non-coding | upstream | 65844 | 29830848 ~ 29831142 (+) |
| G387406 | NA | non-coding | upstream | 185023 | 29711764 ~ 29711963 (+) |
| G387405 | NA | non-coding | upstream | 185277 | 29711303 ~ 29711709 (+) |
| G387401 | NA | non-coding | upstream | 190863 | 29705884 ~ 29706123 (+) |
| G387399 | NA | non-coding | upstream | 193033 | 29703734 ~ 29703953 (+) |
| G387570 | NA | non-coding | downstream | 77245 | 29975379 ~ 29976702 (+) |
| G387556 | LOC106566971 | non-coding | downstream | 98344 | 29996478 ~ 30003512 (+) |
| G387597 | NA | non-coding | downstream | 134567 | 30032701 ~ 30077928 (+) |
| G387655 | NA | non-coding | downstream | 215605 | 30113739 ~ 30184969 (+) |
| spag8 | LOC106566715 | other | upstream | 966055 | 28926263 ~ 28931410 (+) |
| G385805 | NA | other | upstream | 1479431 | 28416605 ~ 28417555 (+) |
| G385171 | LOC106566130 | other | upstream | 1992255 | 27904467 ~ 27904731 (+) |
| G385053 | NA | other | upstream | 2189908 | 27706714 ~ 27707078 (+) |
| G388019 | NA | other | downstream | 388817 | 30286951 ~ 30287824 (+) |
| G390184 | NA | other | downstream | 2062221 | 31960355 ~ 31960745 (+) |
| G390393 | NA | other | downstream | 2322047 | 32220181 ~ 32220533 (+) |
| G391513 | LOC100136561 | other | downstream | 3260692 | 33158826 ~ 33162980 (+) |
| G391805 | NA | other | downstream | 3462823 | 33360957 ~ 33361341 (+) |
