G387570


Basic Information

Item Value
gene id G387570
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 29975379 ~ 29976702 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU440140
GCAGACTCGGTCTCCTCTGGTCCCCAACAAACTTCCCCGGCTGCTGCCCCATAAGGGCAGGGTGCCAGGCCGCAGCCGGGTCTCCAAACTGGGCTCTCTCAGTGCCTGGGTCCGGGGCACCTGGTGGGTAGGGGATGGAGAGCAGGGACCACCTCCGTGGTGTGATTTCCCTCAGTCAGTTTGGCCTCTCCAGATGTTCACTTCTGCATCCCACCGCTGACACCAATCCAGGGGTTTTTGATGGAGGTCAATGCAACGGCAAATAGACGACAAGTCCTTCTCACTGATTCCACCCTCTTGATCATGCATTGACTGCTTTGGTAGAGTCTTACTGTCAGATGAGATCTGGTCTCTTATGGCACTTGTGTCTTTTATTTAAGACACAAGCAGTCACATAGGAGGATACTGGAGGAGCAAGATCTAAGGCCTAATTATGATGGCATACATTCATCCAGCATGTAATAATAGAATGTAGGCCTACGTTCCATATTTGGTCAACAAACGTATTGATTTTCAGCACCATGCAATCCACTGATTTGTCATGACTGATTGTATATTTGACATTCAACTAACATTTTGCTGTCATCTGGACATCCCGCAGTGTTTTTCAGGCCACAATTATGCATGACAAGACGCTACCGCGGGATAAAATGTGTTTGAGGAAAAATCGTGGGAAACTTAGCTAACGAACGTTGGCATTACTCAGATGGTAGGCACTTGCTTCACCAGAAAGCAAATGCTCTGTATTTGAATACAATTTCTGACAACTGAATGTTATTTAGTAGCTATGAAGATGCAAGAATGGCTGTGCAACATTTTGTTTGTTGGAATACTAGCTAGCGAACTAGCTCCAGCTAACGATGGAGCTAGCCTTACTGGCTAGATGGTGGTACGCCGCGCGAGACCCTGGGAATTAACATCGGAACAGTCAACCTAATAACCAGTTCTAACTTCGGACCGTGTACTTCGTCGTCTCGTTTGACTCAATATTGACAACATTAATAAAGGTTTCCCGAACTGTCCAGTGTCCTCCCCAACCCTTAGTATTCAATTCCTATTCAAACTTCGTGTCCACTCTTTCTGTCTTGCGGAGTTTCTCTCCCGTGCACCCCAACCCAGGCACTTTAACCAAGGCGCATACTCCAAACTTCTCGAACCAACCAGTGTGTTGCTTGGGCGTTTTCGTAGCTCCTTCTCAACACGTGCAACTAGCAAGTTCGTCGTTTCTATCTCCCTCGTTTCTAAACGTATTTATTGCTCTTTCGATAAAATCTTAACAATATACACCGGTAGGACAGCCGTC

Function

NR:

description
Tyrosine-protein kinase ABL1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU440140 True 1303 lncRNA 0.47 2 29975379 29976702

Neighbor

gene id symbol gene type direction distance location
LOC110523590 rab14 coding upstream 72456 29859609 ~ 29902923 (+)
tbx5a LOC106566939 coding upstream 211940 29741800 ~ 29763439 (+)
LOC110523583 LOC106566936 coding upstream 252691 29712928 ~ 30103090 (+)
LOC110523581 LOC106566935 coding upstream 529199 29341278 ~ 29446180 (+)
mtfp1 LOC106566934 coding upstream 663051 29304337 ~ 29312328 (+)
LOC110524747 LOC106567126 coding downstream 128591 30105293 ~ 30112442 (+)
LOC110524742 LOC106567059 coding downstream 156970 30133672 ~ 30217715 (+)
LOC110523600 LOC106567149 coding downstream 279671 30256373 ~ 30260305 (+)
rgs3a LOC106565973 coding downstream 363104 30339806 ~ 30495960 (+)
LOC110523597 LOC106565929 coding downstream 698234 30674936 ~ 30711660 (+)
G387484 NA non-coding upstream 144237 29830848 ~ 29831142 (+)
G387406 NA non-coding upstream 263416 29711764 ~ 29711963 (+)
G387405 NA non-coding upstream 263670 29711303 ~ 29711709 (+)
G387401 NA non-coding upstream 269256 29705884 ~ 29706123 (+)
G387399 NA non-coding upstream 271426 29703734 ~ 29703953 (+)
G387556 LOC106566971 non-coding downstream 19776 29996478 ~ 30003512 (+)
G387597 NA non-coding downstream 55999 30032701 ~ 30077928 (+)
G387655 NA non-coding downstream 137037 30113739 ~ 30184969 (+)
G387657 LOC106567126 non-coding downstream 145993 30122695 ~ 30123495 (+)
G387516 NA other upstream 77245 29896986 ~ 29898134 (+)
spag8 LOC106566715 other upstream 1044448 28926263 ~ 28931410 (+)
G385805 NA other upstream 1557824 28416605 ~ 28417555 (+)
G385171 LOC106566130 other upstream 2070648 27904467 ~ 27904731 (+)
G388019 NA other downstream 310249 30286951 ~ 30287824 (+)
G390184 NA other downstream 1983653 31960355 ~ 31960745 (+)
G390393 NA other downstream 2243479 32220181 ~ 32220533 (+)
G391513 LOC100136561 other downstream 3182124 33158826 ~ 33162980 (+)
G391805 NA other downstream 3384255 33360957 ~ 33361341 (+)

Expression


Co-expression Network