Gene
RNA
| Item | Value |
|---|---|
| gene id | G389757 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 31650093 ~ 31650316 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU442512 | True | 224 | lncRNA | 0.33 | 1 | 31650093 | 31650316 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522913 | LOC106565915 | coding | upstream | 677750 | 30966139 ~ 30975087 (+) |
| LOC110522910 | LOC106565903 | coding | upstream | 794495 | 30741854 ~ 30856071 (+) |
| LOC110523597 | LOC106565929 | coding | upstream | 938433 | 30674936 ~ 30711660 (+) |
| rgs3a | LOC106565973 | coding | upstream | 1154133 | 30339806 ~ 30495960 (+) |
| LOC110523600 | LOC106567149 | coding | upstream | 1389788 | 30256373 ~ 30260305 (+) |
| LOC110523608 | NA | coding | downstream | 502592 | 32152908 ~ 32160417 (+) |
| lhx3 | lhx3 | coding | downstream | 607612 | 32257928 ~ 32270782 (+) |
| LOC110523612 | LOC106565885 | coding | downstream | 683186 | 32333502 ~ 32336514 (+) |
| LOC110523614 | LOC106565718 | coding | downstream | 690560 | 32340876 ~ 32390222 (+) |
| nup214 | LOC106565702 | coding | downstream | 754182 | 32404498 ~ 32485105 (+) |
| G389754 | NA | non-coding | upstream | 738 | 31649138 ~ 31649355 (+) |
| G389732 | NA | non-coding | upstream | 16540 | 31633271 ~ 31633553 (+) |
| G389728 | NA | non-coding | upstream | 18644 | 31631188 ~ 31631449 (+) |
| G389447 | NA | non-coding | upstream | 206592 | 31443170 ~ 31443501 (+) |
| G389395 | NA | non-coding | upstream | 269488 | 31380271 ~ 31380605 (+) |
| G389901 | NA | non-coding | downstream | 93856 | 31744172 ~ 31744467 (+) |
| G389915 | NA | non-coding | downstream | 115023 | 31765339 ~ 31765591 (+) |
| G389957 | NA | non-coding | downstream | 174088 | 31824404 ~ 31832448 (+) |
| G389992 | NA | non-coding | downstream | 234223 | 31884539 ~ 31911110 (+) |
| G390199 | NA | non-coding | downstream | 322937 | 31973253 ~ 31973492 (+) |
| G388019 | NA | other | upstream | 1362269 | 30286951 ~ 30287824 (+) |
| G387516 | NA | other | upstream | 1751959 | 29896986 ~ 29898134 (+) |
| tbx5a | LOC106566939 | other | upstream | 1903899 | 29741800 ~ 29763439 (+) |
| spag8 | LOC106566715 | other | upstream | 2719162 | 28926263 ~ 28931410 (+) |
| G385805 | NA | other | upstream | 3232538 | 28416605 ~ 28417555 (+) |
| G390184 | NA | other | downstream | 310039 | 31960355 ~ 31960745 (+) |
| G390393 | NA | other | downstream | 569865 | 32220181 ~ 32220533 (+) |
| G391513 | LOC100136561 | other | downstream | 1508510 | 33158826 ~ 33162980 (+) |
| G391805 | NA | other | downstream | 1710641 | 33360957 ~ 33361341 (+) |
| G392776 | NA | other | downstream | 2497158 | 34147474 ~ 34150795 (+) |
