Gene
RNA
| Item | Value |
|---|---|
| gene id | G389915 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 31765339 ~ 31765591 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU442673 | True | 253 | lncRNA | 0.40 | 1 | 31765339 | 31765591 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522913 | LOC106565915 | coding | upstream | 792996 | 30966139 ~ 30975087 (+) |
| LOC110522910 | LOC106565903 | coding | upstream | 909741 | 30741854 ~ 30856071 (+) |
| LOC110523597 | LOC106565929 | coding | upstream | 1053679 | 30674936 ~ 30711660 (+) |
| rgs3a | LOC106565973 | coding | upstream | 1269379 | 30339806 ~ 30495960 (+) |
| LOC110523600 | LOC106567149 | coding | upstream | 1505034 | 30256373 ~ 30260305 (+) |
| LOC110523608 | NA | coding | downstream | 387317 | 32152908 ~ 32160417 (+) |
| lhx3 | lhx3 | coding | downstream | 492337 | 32257928 ~ 32270782 (+) |
| LOC110523612 | LOC106565885 | coding | downstream | 567911 | 32333502 ~ 32336514 (+) |
| LOC110523614 | LOC106565718 | coding | downstream | 575285 | 32340876 ~ 32390222 (+) |
| nup214 | LOC106565702 | coding | downstream | 638907 | 32404498 ~ 32485105 (+) |
| G389901 | NA | non-coding | upstream | 20872 | 31744172 ~ 31744467 (+) |
| G389757 | NA | non-coding | upstream | 115023 | 31650093 ~ 31650316 (+) |
| G389754 | NA | non-coding | upstream | 115984 | 31649138 ~ 31649355 (+) |
| G389732 | NA | non-coding | upstream | 131786 | 31633271 ~ 31633553 (+) |
| G389728 | NA | non-coding | upstream | 133890 | 31631188 ~ 31631449 (+) |
| G389957 | NA | non-coding | downstream | 58813 | 31824404 ~ 31832448 (+) |
| G389992 | NA | non-coding | downstream | 118948 | 31884539 ~ 31911110 (+) |
| G390199 | NA | non-coding | downstream | 207662 | 31973253 ~ 31973492 (+) |
| G390256 | NA | non-coding | downstream | 251293 | 32016884 ~ 32017191 (+) |
| G390278 | NA | non-coding | downstream | 267208 | 32032799 ~ 32033003 (+) |
| G388019 | NA | other | upstream | 1477515 | 30286951 ~ 30287824 (+) |
| G387516 | NA | other | upstream | 1867205 | 29896986 ~ 29898134 (+) |
| tbx5a | LOC106566939 | other | upstream | 2019145 | 29741800 ~ 29763439 (+) |
| spag8 | LOC106566715 | other | upstream | 2834408 | 28926263 ~ 28931410 (+) |
| G385805 | NA | other | upstream | 3347784 | 28416605 ~ 28417555 (+) |
| G390184 | NA | other | downstream | 194764 | 31960355 ~ 31960745 (+) |
| G390393 | NA | other | downstream | 454590 | 32220181 ~ 32220533 (+) |
| G391513 | LOC100136561 | other | downstream | 1393235 | 33158826 ~ 33162980 (+) |
| G391805 | NA | other | downstream | 1595366 | 33360957 ~ 33361341 (+) |
| G392776 | NA | other | downstream | 2381883 | 34147474 ~ 34150795 (+) |
