G390291


Basic Information

Item Value
gene id G390291
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 32042108 ~ 32042369 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU443071
TAATTGCAGGGTATGGTGAAATTATTAAGCTCCAAGCATGCAGGTTAAGATAAATTAATAGGACAATAATACCAAattatttaaaaatgaaaagctgaaatgtcttgagtcaataagtattcaacccctttgttatggcaaacctaaataagttcaggagtgaaaatgtgcttaacatgtcatatataagttgcatggactcacactgtgtgtaataatagtgcttaacatagatttttgaatgactacctcatctctgtac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU443071 True 262 lncRNA 0.32 1 32042108 32042369

Neighbor

gene id symbol gene type direction distance location
LOC110522913 LOC106565915 coding upstream 1069765 30966139 ~ 30975087 (+)
LOC110522910 LOC106565903 coding upstream 1186510 30741854 ~ 30856071 (+)
LOC110523597 LOC106565929 coding upstream 1330448 30674936 ~ 30711660 (+)
rgs3a LOC106565973 coding upstream 1546148 30339806 ~ 30495960 (+)
LOC110523600 LOC106567149 coding upstream 1781803 30256373 ~ 30260305 (+)
LOC110523608 NA coding downstream 110539 32152908 ~ 32160417 (+)
lhx3 lhx3 coding downstream 215559 32257928 ~ 32270782 (+)
LOC110523612 LOC106565885 coding downstream 291133 32333502 ~ 32336514 (+)
LOC110523614 LOC106565718 coding downstream 298507 32340876 ~ 32390222 (+)
nup214 LOC106565702 coding downstream 362129 32404498 ~ 32485105 (+)
G390289 NA non-coding upstream 3748 32037966 ~ 32038360 (+)
G390278 NA non-coding upstream 9105 32032799 ~ 32033003 (+)
G390256 NA non-coding upstream 24917 32016884 ~ 32017191 (+)
G390199 NA non-coding upstream 68616 31973253 ~ 31973492 (+)
G389992 NA non-coding upstream 130998 31884539 ~ 31911110 (+)
G390283 NA non-coding downstream 43981 32086350 ~ 32091489 (+)
G390361 NA non-coding downstream 133937 32176306 ~ 32176517 (+)
G390369 NA non-coding downstream 148949 32191318 ~ 32191719 (+)
G390372 NA non-coding downstream 151831 32194200 ~ 32194428 (+)
G390184 NA other upstream 81363 31960355 ~ 31960745 (+)
G388019 NA other upstream 1754284 30286951 ~ 30287824 (+)
G387516 NA other upstream 2143974 29896986 ~ 29898134 (+)
tbx5a LOC106566939 other upstream 2295914 29741800 ~ 29763439 (+)
spag8 LOC106566715 other upstream 3111177 28926263 ~ 28931410 (+)
G390393 NA other downstream 177812 32220181 ~ 32220533 (+)
G391513 LOC100136561 other downstream 1116457 33158826 ~ 33162980 (+)
G391805 NA other downstream 1318588 33360957 ~ 33361341 (+)
G392776 NA other downstream 2105105 34147474 ~ 34150795 (+)
G394882 NA other downstream 3862743 35905112 ~ 35905781 (+)

Expression


Co-expression Network