G394882


Basic Information

Item Value
gene id G394882
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 35905112 ~ 35905781 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU448046
gtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccacttcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaagactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggtgggagactctgtccataggacaacaatcagtcatatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgtcgtttaaagtttgccacaagctacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctgaacacaccatccccactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggtccattctggaagaaaacctgatggagtctgcaaaagacctgagactgggacggagatttgtcttccaacaagac

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU448046 True 670 TUCP 0.44 1 35905112 35905781

Neighbor

gene id symbol gene type direction distance location
sppl3 LOC106565002 coding upstream 42486 35824213 ~ 35862626 (+)
si:dkey-106l3.7 LOC106563357 coding upstream 237922 35659228 ~ 35667190 (+)
LOC110523670 LOC106565078 coding upstream 254109 35639728 ~ 35651003 (+)
atp8b5b LOC106565083 coding upstream 284564 35602601 ~ 35620548 (+)
unc13bb LOC106565090 coding upstream 309494 35546545 ~ 35595618 (+)
kcnn2 LOC106564970 coding downstream 24333 35930114 ~ 35960310 (+)
drg1 drg1 coding downstream 57420 35963201 ~ 35966744 (+)
slc20a1b LOC106564912 coding downstream 100425 36006206 ~ 36019354 (+)
you2 you2 coding downstream 127480 36033260 ~ 36034806 (+)
LOC110523693 ggcx coding downstream 136737 36042518 ~ 36056035 (+)
G394881 NA non-coding upstream 2385 35902510 ~ 35902727 (+)
G394879 NA non-coding upstream 3682 35901208 ~ 35901430 (+)
G394870 NA non-coding upstream 19279 35878968 ~ 35885833 (+)
G394869 NA non-coding upstream 27297 35873604 ~ 35877815 (+)
G394871 NA non-coding upstream 31840 35872855 ~ 35873272 (+)
G394883 NA non-coding downstream 230 35906011 ~ 35906218 (+)
G394885 NA non-coding downstream 2528 35908309 ~ 35918853 (+)
G394904 NA non-coding downstream 37555 35943336 ~ 36035345 (+)
G394923 NA non-coding downstream 72075 35977856 ~ 35983731 (+)
G394958 NA non-coding downstream 193592 36099373 ~ 36108885 (+)
G392776 NA other upstream 1756411 34147474 ~ 34150795 (+)
G391805 NA other upstream 2543771 33360957 ~ 33361341 (+)
G391513 LOC100136561 other upstream 2742132 33158826 ~ 33162980 (+)
G390393 NA other upstream 3684579 32220181 ~ 32220533 (+)
G390184 NA other upstream 3944367 31960355 ~ 31960745 (+)
G394910 NA other downstream 61156 35966937 ~ 36004829 (+)
G395005 LOC106564805 other downstream 297120 36202901 ~ 36206616 (+)
G395034 NA other downstream 374519 36280300 ~ 36301290 (+)
G396022 kdm2b other downstream 1059303 36965084 ~ 36965652 (+)

Expression


Co-expression Network