G394910


Basic Information

Item Value
gene id G394910
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 35966937 ~ 36004829 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU448080
tcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaaacaaaaactgaaaaattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctccagaagttcagtgaggatctctgaaagatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgtcaaaagcgcagagagcatcatgaagaacaaggaacacaccaggctggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaatatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaagactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggtgggagactctgtccataggacaacaatcaaagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgtcgtttaaagtttgccacaagccacctgggagacacttccacaaacatgtggaagaaggtgctctggtcagatgtaaccaaaattgaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctgaacacctgaacacaccatccccactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttc

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU448080 True 887 TUCP 0.43 2 35966937 36004829

Neighbor

gene id symbol gene type direction distance location
drg1 drg1 coding upstream 193 35963201 ~ 35966744 (+)
kcnn2 LOC106564970 coding upstream 6627 35930114 ~ 35960310 (+)
sppl3 LOC106565002 coding upstream 104311 35824213 ~ 35862626 (+)
si:dkey-106l3.7 LOC106563357 coding upstream 299747 35659228 ~ 35667190 (+)
LOC110523670 LOC106565078 coding upstream 315934 35639728 ~ 35651003 (+)
slc20a1b LOC106564912 coding downstream 1377 36006206 ~ 36019354 (+)
you2 you2 coding downstream 28432 36033260 ~ 36034806 (+)
LOC110523693 ggcx coding downstream 37689 36042518 ~ 36056035 (+)
LOC110523692 LOC106564846 coding downstream 80295 36085124 ~ 36120105 (+)
LOC110523704 LOC100136432 coding downstream 366537 36371366 ~ 36376388 (+)
G394885 NA non-coding upstream 48084 35908309 ~ 35918853 (+)
G394883 NA non-coding upstream 60719 35906011 ~ 35906218 (+)
G394881 NA non-coding upstream 64210 35902510 ~ 35902727 (+)
G394879 NA non-coding upstream 65507 35901208 ~ 35901430 (+)
G394870 NA non-coding upstream 81104 35878968 ~ 35885833 (+)
G394958 NA non-coding downstream 94544 36099373 ~ 36108885 (+)
G394970 LOC106563191 non-coding downstream 115477 36120306 ~ 36121931 (+)
G395041 nfkbil1 non-coding downstream 255322 36260151 ~ 36261227 (+)
G395035 NA non-coding downstream 277902 36282731 ~ 36288452 (+)
G395062 NA non-coding downstream 297621 36302450 ~ 36302649 (+)
G394882 NA other upstream 61156 35905112 ~ 35905781 (+)
G392776 NA other upstream 1818236 34147474 ~ 34150795 (+)
G391805 NA other upstream 2605596 33360957 ~ 33361341 (+)
G391513 LOC100136561 other upstream 2803957 33158826 ~ 33162980 (+)
G390393 NA other upstream 3746404 32220181 ~ 32220533 (+)
G395005 LOC106564805 other downstream 198072 36202901 ~ 36206616 (+)
G395034 NA other downstream 275471 36280300 ~ 36301290 (+)
G396022 kdm2b other downstream 960255 36965084 ~ 36965652 (+)
m17 m17 other downstream 1404372 37409195 ~ 37411565 (+)

Expression


Co-expression Network