Gene
RNA
| Item | Value |
|---|---|
| gene id | G397959 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 38978689 ~ 38978931 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU451531 | True | 243 | lncRNA | 0.37 | 1 | 38978689 | 38978931 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| bmpr1bb | LOC106564072 | coding | upstream | 297520 | 38569703 ~ 38681169 (+) |
| pdlim5b | LOC106564051 | coding | upstream | 409535 | 38496984 ~ 38569154 (+) |
| opn4xa | opn4x1b2 | coding | upstream | 498005 | 38436446 ~ 38480684 (+) |
| LOC110523766 | LOC106564097 | coding | upstream | 590592 | 38361166 ~ 38388097 (+) |
| LOC110523763 | wdr70 | coding | upstream | 662399 | 38230285 ~ 38316290 (+) |
| rfx3 | LOC106563985 | coding | downstream | 29116 | 39008047 ~ 39067301 (+) |
| LOC110522932 | LOC106563304 | coding | downstream | 211534 | 39190465 ~ 39191487 (+) |
| LOC110523777 | LOC106563114 | coding | downstream | 319011 | 39297942 ~ 39317727 (+) |
| LOC110523778 | NA | coding | downstream | 344710 | 39323641 ~ 39327183 (+) |
| nadk2 | LOC106563865 | coding | downstream | 352226 | 39331157 ~ 39338343 (+) |
| G397946 | NA | non-coding | upstream | 13305 | 38965133 ~ 38965384 (+) |
| G397945 | NA | non-coding | upstream | 15234 | 38963249 ~ 38963455 (+) |
| G397944 | NA | non-coding | upstream | 16965 | 38961519 ~ 38961724 (+) |
| G397943 | NA | non-coding | upstream | 17229 | 38961165 ~ 38961460 (+) |
| G397940 | NA | non-coding | upstream | 22575 | 38955878 ~ 38956114 (+) |
| G397962 | NA | non-coding | downstream | 3217 | 38982148 ~ 38982370 (+) |
| G397958 | NA | non-coding | downstream | 27454 | 39006385 ~ 39007160 (+) |
| G397971 | NA | non-coding | downstream | 50512 | 39029443 ~ 39029671 (+) |
| G397973 | NA | non-coding | downstream | 52376 | 39031307 ~ 39031522 (+) |
| srsf9 | sfrs9 | other | upstream | 1057453 | 37917781 ~ 37921282 (+) |
| m17 | m17 | other | upstream | 1567790 | 37409195 ~ 37411565 (+) |
| G396022 | kdm2b | other | upstream | 2013037 | 36965084 ~ 36965652 (+) |
| G395034 | NA | other | upstream | 2677399 | 36280300 ~ 36301290 (+) |
| G395005 | LOC106564805 | other | upstream | 2772073 | 36202901 ~ 36206616 (+) |
| G399169 | gpat3 | other | downstream | 783185 | 39762116 ~ 39765843 (+) |
| G399919 | NA | other | downstream | 1462824 | 40441755 ~ 40442086 (+) |
| G400154 | NA | other | downstream | 1885998 | 40864929 ~ 40881126 (+) |
| G400267 | LOC106561151 | other | downstream | 2126593 | 41105524 ~ 41106754 (+) |
