Gene
RNA
| Item | Value |
|---|---|
| gene id | G399543 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 40036605 ~ 40037043 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU453247 | True | 439 | lncRNA | 0.47 | 1 | 40036605 | 40037043 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523797 | rxfp3 | coding | downstream | 103956 | 39930493 ~ 39932649 (-) |
| LOC110522936 | NA | coding | downstream | 222697 | 39808813 ~ 39813908 (-) |
| mrps18c | mrps18c | coding | downstream | 253279 | 39777911 ~ 39783326 (-) |
| LOC110523789 | gpat3 | coding | downstream | 263555 | 39762574 ~ 39773050 (-) |
| LOC110523784 | LOC106609062 | coding | downstream | 478364 | 39554978 ~ 39558241 (-) |
| LOC110522937 | LOC105014731 | coding | upstream | 95057 | 40132100 ~ 40169848 (-) |
| LOC110523803 | LOC106563547 | coding | upstream | 178432 | 40215475 ~ 40230869 (-) |
| LOC110522939 | LOC106568256 | coding | upstream | 235895 | 40272938 ~ 40307876 (-) |
| LOC118964588 | NA | coding | upstream | 282343 | 40319386 ~ 40342806 (-) |
| LOC110523807 | LOC106563476 | coding | upstream | 396890 | 40433933 ~ 40547668 (-) |
| G399520 | NA | non-coding | downstream | 31330 | 40004981 ~ 40005275 (-) |
| G399478 | NA | non-coding | downstream | 44800 | 39988932 ~ 39991805 (-) |
| G399470 | slc45a2 | non-coding | downstream | 110341 | 39924194 ~ 39926264 (-) |
| G399468 | slc45a2 | non-coding | downstream | 115824 | 39914948 ~ 39920781 (-) |
| G399422 | NA | non-coding | downstream | 185741 | 39850045 ~ 39850864 (-) |
| G399594 | NA | non-coding | upstream | 59815 | 40096858 ~ 40097094 (-) |
| G399599 | NA | non-coding | upstream | 63923 | 40100966 ~ 40101189 (-) |
| G399715 | NA | non-coding | upstream | 121024 | 40158067 ~ 40158281 (-) |
| G399728 | NA | non-coding | upstream | 138797 | 40175840 ~ 40176072 (-) |
| G399734 | NA | non-coding | upstream | 143632 | 40180675 ~ 40181014 (-) |
| capslb | LOC106563770 | other | downstream | 511081 | 39522323 ~ 39525554 (-) |
| LOC110522860 | LOC106565786 | other | downstream | 909809 | 39125473 ~ 39129083 (-) |
| G398487 | NA | other | downstream | 911446 | 39124485 ~ 39125159 (-) |
| G397500 | cssa01h5orf42 | other | downstream | 1811085 | 38224981 ~ 38225520 (-) |
| G397378 | NA | other | downstream | 1966631 | 38066275 ~ 38069974 (-) |
| G399742 | LOC106563559 | other | upstream | 157098 | 40194141 ~ 40201203 (-) |
| G399819 | NA | other | upstream | 240975 | 40278018 ~ 40282951 (-) |
| G400909 | hsp30 | other | upstream | 531164 | 40568207 ~ 40570604 (-) |
| G401044 | NA | other | upstream | 818728 | 40855771 ~ 40858019 (-) |
| G401046 | NA | other | upstream | 825089 | 40862132 ~ 40870205 (-) |
