Gene
RNA
| Item | Value |
|---|---|
| gene id | G402560 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 42562330 ~ 42562603 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU456802 | True | 274 | lncRNA | 0.30 | 1 | 42562330 | 42562603 |
42,561,200
42,561,600
42,562,000
42,562,400
42,562,800
42,563,200
42,563,600
42,564,000
42,564,400
42,564,800
42,565,200
42,565,600
NC_048569.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523874 | LOC106562139 | coding | downstream | 49017 | 42507730 ~ 42528588 (-) |
| LOC118964609 | LOC106562139 | coding | downstream | 61252 | 42495495 ~ 42501078 (-) |
| LOC110523872 | LOC106562158 | coding | downstream | 99580 | 42432069 ~ 42462750 (-) |
| LOC110523871 | NA | coding | downstream | 139704 | 42420104 ~ 42422626 (-) |
| LOC110522948 | LOC106562191 | coding | downstream | 235760 | 42308713 ~ 42326570 (-) |
| pja2 | pja2 | coding | upstream | 51862 | 42614465 ~ 42628345 (-) |
| tmem232 | tmem232 | coding | upstream | 142228 | 42703601 ~ 42719328 (-) |
| ntrk2b | LOC106562076 | coding | upstream | 250469 | 42813072 ~ 42835356 (-) |
| pcsk5a | LOC106562014 | coding | upstream | 328250 | 42890853 ~ 42925887 (-) |
| LOC110523888 | LOC106562020 | coding | upstream | 371700 | 42934303 ~ 42982168 (-) |
| G401917 | NA | non-coding | downstream | 183113 | 42378925 ~ 42379217 (-) |
| G401894 | NA | non-coding | downstream | 206699 | 42355313 ~ 42355631 (-) |
| G401893 | NA | non-coding | downstream | 207347 | 42354694 ~ 42354983 (-) |
| G402561 | NA | non-coding | upstream | 299 | 42562902 ~ 42563135 (-) |
| G402562 | NA | non-coding | upstream | 6597 | 42569200 ~ 42569834 (-) |
| G402566 | NA | non-coding | upstream | 13130 | 42575733 ~ 42575977 (-) |
| G402569 | NA | non-coding | upstream | 14476 | 42577079 ~ 42577581 (-) |
| G402616 | NA | non-coding | upstream | 104770 | 42667373 ~ 42668575 (-) |
| plac8.2 | plac8 | other | downstream | 526689 | 42033371 ~ 42035641 (-) |
| G401190 | denr | other | downstream | 1120341 | 41417117 ~ 41441989 (-) |
| LOC110523841 | LOC106562568 | other | downstream | 1148650 | 41411545 ~ 41414099 (-) |
| LOC110523839 | LOC106561138 | other | downstream | 1156551 | 41373889 ~ 41405792 (-) |
| G401176 | NA | other | downstream | 1366671 | 41194317 ~ 41195659 (-) |
| G403104 | NA | other | upstream | 982084 | 43544687 ~ 43548274 (-) |
| G404357 | NA | other | upstream | 1810895 | 44373498 ~ 44373874 (-) |
| G404520 | NA | other | upstream | 2077198 | 44639801 ~ 44640045 (-) |
| G404649 | NA | other | upstream | 2199012 | 44761615 ~ 44762033 (-) |
| G404935 | LOC106561730 | other | upstream | 2435633 | 44998236 ~ 44998709 (-) |
