XLOC_023356


Basic Information

Item Value
gene id XLOC_023356
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 14441954 ~ 14445136 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00047167
GCAAATTAGCTTTACTATAATAAAACTAAGTTTATCCAAacaatacacataaaaaaaaacaaaaaaaaaacatttgtgcaaTTTAGCACCTTATTTACTAATTCGGTAATAATTCGATTAATTCGAAATTAATAATTCGGCCTAGAAGGCTTCATTTCCTCTGTTAAACTGAAAAGATAACCAGGATATGATTTTAAATGTTGCAATAACAGAATTCTTTATTTACAATTCAATTTGATTCAACATCAAATAGCATCAGCAAAGCCATATTAGTTGACAACTTGCataactgtatttaaatttctctcGGTATATCTAACTTTGCATAAAAGGCTCACACTAAGATTACACACATCGATGCGGATGAACAGAGATGTTTATGTGACcacaactggaaaaaaaaaatacatctcaGGAGCGCAACACTGTAAGCTTTCTCCAAAAAGTCCTTATAAATTACATATTGCTTCGATTTCCCATTGCATCGTCTTCATTCTCACACAACTGAGAGGGTAAAATCAGGACTGTACAAATAATAAAACCCACAACTGatcacaaacaaaaaatatggaaaatgagCAATATTGAGACTGGAGGAGAGAGTGAAGGTGTGTGAGGGAATAGAGAGAAAGAGTATATCCAGCAGTAATGAACTGGGTCGATCCTGTCAATGATTCACTATACAAATATAATACAGACAACTTTTGTAATATACAAGACAGTAAAACAGATCTAAGGCAATATGCTAGGTTTTAGCATTTCAAGGTCGTTGCATTTAGCTCTAAGAAATTGGCAGACTAtacaaaaagacatttaaagtCTCAGAAAAGAATCCAAAGGTAAGGTAAAGACAAATCATTTTTAGGAAATTCAATAGCCGTTACAAttccattgatttatttctttgttttaggACAAATGGCTCTTTTTGCACTAGCGCTGATAAAAAGACTAGAAAACTCTGCACCACCTTCACATCATGgcttatatttatttcaaaatctTGACAATCTTTGGACTTTGCCGAGGGTAGTGGTAACATGTGCGACCTCAAAACTGGCTATTCTCCAATATGATAGTAGTAGATGCGTCTGGATGTCACTCCTAGATCAAGGCATCCAACATTCATCAAAACTGTGATCAAAAAAAGCTTGGAATAAATGAGTACTTGAGTAGTTTATAATGCTATGTTAGCAAGAATTCATTTGAATCGACTTTTAAATCAACTTTGAGGATACAGAAAGTTTTGAATGGTGGGCAGAGTGACGCTTCATCCCAAACGATGTGAAATCAAACTtgtatttacagtgtaaaagGAAAAGCTAAAGCCATACCAAAACACCAGGTATAATTCGTACACAACCACGGCACCTTCAGCGCATAATGACAGAGCTGGTCGTCGCAAACTTCAGTTGCTGCTGCtggtacatacagtatatacttaAAAACACGtagctttttttttaacacaccaGCTTAAACACAGATGACATGGCGATATTTTCAGCGAAAGCTAAAAGCTAACAATCTTACCCCGATAACTTGCCCTGTGTGCAAATATGAAACGAAAATTAAAGTAGTATGTGTAATTCTTCCGATCAATTCAAAGGCAAGGAAATTTGGCTTCGTCCTCAAACAGACTAGAAAACACGAACTGTATTGCGAACGTTACAGCGAGTTCACGTGACCGGAGCGACCGTTAATTCAAATCTGAACTGTTGATTCGGATGTTCTCAAAACGGCAACAAGTGTGAATGTTGGAAAAGCCACTAAAACATgaatgctgctttatttattcGTTCGTTTTTGGCTACACCAGAACTAAAACCTGTTTTTTCCACAGAGGAACAAGTAGATTTGGACATCTCctcgtttttttctttttatttattttcaaaatagaaaccactatttaaaaaaaaaacctttaatacTGAGATTGAACCCGGGGAGCAAAATGTGTCTCCTGAATAGTCCTGtacaaaaattacaaaacaaaagaaaagaaaatctcaAGTAatatttattgcttgttttttctTACACACACCGGATTCTGTTTGTACCTATAGCATCTGGCATGAAGCAGGTCACTCCACACAACAAAGAAAGCACGCTTCAGTGTTGAGTTTATGGCTGTGTTGGGGTTCCTCCGGTGGGGCTCCCGGCTAAAGGCTTAGAAGCAAGCGAGTATCTGTACACTGTACACACAGCACCCTCCCAGACCCCCACCCAGGAAAGAAGGACCACCGCACCACAGCAGCTCCCCTTCCTTCTAATAGTACCACAGGAATCTGCACGTCCTTAGCTTCCCGCCAAACACGCTTGACGTCAGAAACTCCGCCATCTTTTTTCCAGAGACAGTTAAGACCGGACTTTGAGGGCAGGAGGAAGGGGAAATATttcgaaaagaaaaataaatataatacgaAAGAGATTCCCCCATTATTGGTATATACAATCTACCAGCATTTCATTTAACTAACCACAACAAAATCACATTCTCTCTGAAACTACTGGACCAAGGAAAATAAAAATTCATAGATTGGAAAGAGAGAGAAAGTCGGCTGGGCAAAAGAATGTCTTCTTAAGAAGAGCCTGAAGTCCAGAGGAAGAAACGGGAGAAAAAGAGAGTGAGGAATACATTCATGGGAGACGAGGATTCCGATGCCACTGCCACAGAGTCTTTTCAGGGGAGACCTAAGTCACACTACGGTGAATGCAGCGGAGCAGACTGACGGAAAGGGCTTGCAGTGTAAGTACGAGACAGAAAGGCCGTGCTCGACTGAAGGGGCGGTTTAGGTCCAGAAGATCAAAGTgtcagtgtttgtttgtgtttgtgtgtgtaaaggaGACTGTCCGTCCCCTCCGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00047167 True 2872 lncRNA 0.39 2 14441954 14445136

Neighbor

gene id symbol gene type direction distance location
XLOC_023355 xkr9 coding downstream 229433 14202327 ~ 14212521 (-)
XLOC_023354 CR450741.1 coding downstream 832240 13609598 ~ 13609714 (-)
XLOC_023353 KCNB2 coding downstream 875939 13361846 ~ 13566015 (-)
XLOC_023352 NA coding downstream 1084302 13355278 ~ 13357652 (-)
XLOC_023351 terf1 coding downstream 1092152 13336327 ~ 13349802 (-)
XLOC_023357 BX294113.2 coding upstream 88706 14533842 ~ 14536411 (-)
XLOC_023358 pabpn1 coding upstream 114192 14559328 ~ 14577559 (-)
XLOC_023359 jph1a coding upstream 178695 14623831 ~ 14712427 (-)
XLOC_023360 NA coding upstream 560376 15005512 ~ 15032354 (-)
XLOC_023361 cd226 coding upstream 668956 15114092 ~ 15263142 (-)
XLOC_023665 dre-mir-735 misc upstream 23732825 38177961 ~ 38178027 (-)
XLOC_023349 NA non-coding downstream 1196069 13224248 ~ 13245885 (-)
XLOC_023348 NA non-coding downstream 1316481 13058667 ~ 13125473 (-)
XLOC_023341 NA non-coding downstream 1695455 12741936 ~ 12746499 (-)
XLOC_023362 BX950202.1 non-coding upstream 768735 15213871 ~ 15213985 (-)
XLOC_023364 NA non-coding upstream 1299934 15745070 ~ 15749414 (-)
XLOC_023365 CU207257.1 non-coding upstream 1628953 16074089 ~ 16075115 (-)

Expression


Co-expression Network