G404519



Basic Information


Item Value
gene id G404519
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 44639496 ~ 44639751 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU458966
CTCCACCCTACATGCTTATGTATAAACCTAcacaaggtgctatctagaacctaaaagggttatttggctgtccccgtaggaggaccctttgaataacccttttggttcaaggtaaaaacattttggtttcaggtagaacccttttttttacctggaactaaaaagggttctcctatgaggacagccgaataacccttttggaacccttttttctaagagtgtacatcaaccactccagtaccactgcacattgaat

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU458966 True 256 lncRNA 0.41 1 44639496 44639751

Neighbor


gene id symbol gene type direction distance location
LOC110523917 LOC106561827 coding downstream 16180 44610017 ~ 44623316 (-)
tcp4 NA coding downstream 33012 44590633 ~ 44606484 (-)
LOC110523916 ppip2 coding downstream 49434 44574333 ~ 44590062 (-)
LOC110523912 LOC100380870 coding downstream 87714 44500751 ~ 44551782 (-)
LOC118964612 NA coding upstream 43191 44682942 ~ 44685539 (-)
LOC118936294 LOC106561814 coding upstream 113164 44752915 ~ 44757984 (-)
LOC110523920 LOC106561814 coding upstream 113164 44752915 ~ 44758266 (-)
arl15b arl15 coding upstream 140017 44779768 ~ 44853071 (-)
LOC110523925 LOC106562826 coding upstream 275433 44915184 ~ 44933176 (-)
G404507 NA non-coding downstream 5947 44633343 ~ 44633549 (-)
G404496 NA non-coding downstream 13141 44626052 ~ 44626355 (-)
G404494 NA non-coding downstream 13985 44625187 ~ 44625511 (-)
G404491 NA non-coding downstream 15101 44624095 ~ 44624395 (-)
G404484 NA non-coding downstream 31934 44607350 ~ 44607562 (-)
G404623 NA non-coding upstream 74446 44714197 ~ 44717232 (-)
G404641 LOC106561807 non-coding upstream 96035 44735786 ~ 44739702 (-)
G404643 LOC106561807 non-coding upstream 100517 44740268 ~ 44741806 (-)
G404650 LOC106561792 non-coding upstream 122326 44762077 ~ 44762467 (-)
G404357 NA other downstream 265622 44373498 ~ 44373874 (-)
G403104 NA other downstream 1091222 43544687 ~ 43548274 (-)
plac8.2 plac8 other downstream 2603855 42033371 ~ 42035641 (-)
G401190 denr other downstream 3197507 41417117 ~ 41441989 (-)
LOC110523841 LOC106562568 other downstream 3225816 41411545 ~ 41414099 (-)
G404520 NA other upstream 50 44639801 ~ 44640045 (-)
G404649 NA other upstream 121864 44761615 ~ 44762033 (-)
G404935 LOC106561730 other upstream 358485 44998236 ~ 44998709 (-)
G405292 LOC106561687 other upstream 551781 45191532 ~ 45192467 (-)
G405871 NA other upstream 945897 45585648 ~ 45586183 (-)

Expression



Co-expression Network