G405217



Basic Information


Item Value
gene id G405217
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 45059754 ~ 45098855 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU459741
ggtccttcttgcccggttgctcagtttggtcagacagccagctctaggcagagtcagTTCCATATTTGTTCAATTTCccatgatggagaccactgtgctcttgaaaACCTTCCACACTCTAGAAatggttttatacccttccccagatatgcctcatcacaattctatctcgGAGATCTATGGACAGTTCATTgtacttcatggtatagtttctgctctgacatgcactgtcaactgtgggaccttatatagacaggtgtgtgcctttccaaatcatgtccaatcaattgaatttaccacaggtggactccaatcaagttgtagaaacatcaaggatgatcaatggcaataggatgcacctgagctcaatttcgagtctcatagt

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU459741 True 385 lncRNA 0.44 2 45059754 45098855

Neighbor


gene id symbol gene type direction distance location
morn5 LOC106561708 coding downstream 7512 45035746 ~ 45052242 (-)
LOC110522867 NA coding downstream 66173 44970211 ~ 44993581 (-)
LOC110523925 LOC106562826 coding downstream 126578 44915184 ~ 44933176 (-)
arl15b arl15 coding downstream 206683 44779768 ~ 44853071 (-)
LOC110523920 LOC106561814 coding downstream 301488 44752915 ~ 44758266 (-)
LOC110523936 LOC106561621 coding upstream 243784 45342639 ~ 45472051 (-)
LOC110523950 LOC106561514 coding upstream 920843 46019698 ~ 46023840 (-)
LOC110523952 LOC106568444 coding upstream 1036557 46135412 ~ 46171517 (-)
LOC110523954 plgrkt coding upstream 1202957 46301812 ~ 46322518 (-)
LOC110523958 ermp1 coding upstream 1312101 46410956 ~ 46450430 (-)
G404964 NA non-coding downstream 24162 45035385 ~ 45035592 (-)
G404963 NA non-coding downstream 24748 45034765 ~ 45035006 (-)
G404962 NA non-coding downstream 25394 45034133 ~ 45034360 (-)
G404961 NA non-coding downstream 25862 45033313 ~ 45033892 (-)
G404930 NA non-coding downstream 70197 44989328 ~ 44989557 (-)
G405278 NA non-coding upstream 75374 45174229 ~ 45174435 (-)
G405316 NA non-coding upstream 252004 45350859 ~ 45351540 (-)
G405311 NA non-coding upstream 253505 45352360 ~ 45353285 (-)
G405313 NA non-coding upstream 254652 45353507 ~ 45353863 (-)
G404935 LOC106561730 other downstream 61045 44998236 ~ 44998709 (-)
G404649 NA other downstream 297721 44761615 ~ 44762033 (-)
G404520 NA other downstream 419709 44639801 ~ 44640045 (-)
G404357 NA other downstream 685880 44373498 ~ 44373874 (-)
G403104 NA other downstream 1511480 43544687 ~ 43548274 (-)
G405292 LOC106561687 other upstream 92677 45191532 ~ 45192467 (-)
G405871 NA other upstream 486793 45585648 ~ 45586183 (-)
G405889 LOC106561608 other upstream 513573 45612428 ~ 45612955 (-)
G406076 LOC100136563 other upstream 883983 45977280 ~ 45989483 (-)

Expression



Co-expression Network