XLOC_023366



Basic Information


Item Value
gene id XLOC_023366
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 16146503 ~ 16147518 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00047169
GCGACACATCAAAATTCAAGCATGACAAATCCAAGCTTGATTAATTAGAACACCAGTATAAATTCAGCAATCAGAAGAAAAACACTGTCTGCTACTGAAAATCATCAATATGCATTTAACACCGTTACAAAACTCGTTTCATCTGTTGTCTTCAATGACGATTGTTCTCCTCGGATATGTGTCTATCTCCACAAAAATATACCGAAATTCATACTTCCCTGTCTCAGGATTCTcctttgttcaATCCTTTTTTATGCACCtttagcagcaattacagcctcaagtctttttgaatatgacgccacaagcttggcacag

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00047169 True 318 lncRNA 0.37 2 16146503 16147518

Neighbor


gene id symbol gene type direction distance location
XLOC_023365 CU207257.1 coding downstream 71388 16074089 ~ 16075115 (-)
XLOC_023364 NA coding downstream 397089 15745070 ~ 15749414 (-)
XLOC_023363 cbln2b coding downstream 497625 15642577 ~ 15648878 (-)
XLOC_023361 cd226 coding downstream 883361 15114092 ~ 15263142 (-)
XLOC_023362 BX950202.1 coding downstream 932518 15213871 ~ 15213985 (-)
XLOC_023367 NA coding upstream 57270 16204788 ~ 16222786 (-)
XLOC_023368 CR354550.1 coding upstream 407351 16554869 ~ 16554983 (-)
XLOC_023369 mtrr coding upstream 703695 16851213 ~ 16905018 (-)
XLOC_023370 cmbl coding upstream 764730 16912248 ~ 16917086 (-)
XLOC_023371 klhl15 coding upstream 815451 16962969 ~ 16980337 (-)
XLOC_023665 dre-mir-735 misc upstream 22030443 38177961 ~ 38178027 (-)
XLOC_023360 NA non-coding downstream 1114149 15005512 ~ 15032354 (-)
XLOC_023357 BX294113.2 non-coding downstream 1610092 14533842 ~ 14536411 (-)
XLOC_023376 NA non-coding upstream 976892 17124410 ~ 17126986 (-)
XLOC_023377 CR376737.1 non-coding upstream 989231 17136749 ~ 17139114 (-)
XLOC_023378 NA non-coding upstream 1086008 17233526 ~ 17236200 (-)

Expression



Co-expression Network