G406057


Basic Information

Item Value
gene id G406057
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 45911191 ~ 45911790 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU460654
taccacctgggggcagcccgtcaggaagtcccggatccagttgcagagggaggtttttagtcccaggttccttagcttattgatgagctttgtgagcactatggtgttgaatgctgagctgtagtcaatgaatagcattctcacataggtgttccttttgtccaggtgggaaagggcagtgtggagtgcaatagagactgcatcatctgtggatctgttggggtggtatggaaattggagtgggtctagggtttctgggataatggtgttgatgtgagccatgaccagcctttcaaagcacttcatggctacagacgtgagtgctacaggttggtagtcatttaggcaggttaccttagtgttcttgggcacaggcactatggtggtctgcttaaaacatgttggtattacagactcggacagggagaggttgaaaatgtcagtgaagacacttgctagttggtcagcgcatgctcgcagtacacgtcctggtaatctgtctggccctgcggccttgtgaatgttgacctggctaaaggtcttactcacatcggctgcggagagggTGGTCACACAGTCTttcggtacagctggtgctct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU460654 True 600 lncRNA 0.50 1 45911191 45911790

Neighbor

gene id symbol gene type direction distance location
LOC110523936 LOC106561621 coding downstream 439140 45342639 ~ 45472051 (-)
morn5 LOC106561708 coding downstream 858949 45035746 ~ 45052242 (-)
LOC110522867 NA coding downstream 917610 44970211 ~ 44993581 (-)
LOC110523925 LOC106562826 coding downstream 978015 44915184 ~ 44933176 (-)
arl15b arl15 coding downstream 1058120 44779768 ~ 44853071 (-)
LOC110523950 LOC106561514 coding upstream 107908 46019698 ~ 46023840 (-)
LOC110523952 LOC106568444 coding upstream 223622 46135412 ~ 46171517 (-)
LOC110523954 plgrkt coding upstream 390022 46301812 ~ 46322518 (-)
LOC110523958 ermp1 coding upstream 499166 46410956 ~ 46450430 (-)
LOC110523959 kiaa2026 coding upstream 556245 46468035 ~ 46480496 (-)
G406049 NA non-coding downstream 13223 45897684 ~ 45897968 (-)
G405987 NA non-coding downstream 146066 45764403 ~ 45765125 (-)
G405942 NA non-coding downstream 155738 45695478 ~ 45755453 (-)
G405897 NA non-coding downstream 285311 45622812 ~ 45625880 (-)
G405896 NA non-coding downstream 290705 45620271 ~ 45620486 (-)
G406062 NA non-coding upstream 5636 45917426 ~ 45917644 (-)
G406072 NA non-coding upstream 18250 45930040 ~ 45931456 (-)
G406076 LOC100136563 non-coding upstream 65490 45977280 ~ 45989483 (-)
G406077 lcn2 non-coding upstream 65642 45977432 ~ 45982222 (-)
G406155 NA non-coding upstream 156014 46067804 ~ 46068042 (-)
G405889 LOC106561608 other downstream 298236 45612428 ~ 45612955 (-)
G405871 NA other downstream 325008 45585648 ~ 45586183 (-)
G405292 LOC106561687 other downstream 718724 45191532 ~ 45192467 (-)
G404935 LOC106561730 other downstream 912482 44998236 ~ 44998709 (-)
G404649 NA other downstream 1149158 44761615 ~ 44762033 (-)
G406588 NA other upstream 307877 46219667 ~ 46234537 (-)
LOC110523962 LOC106561388 other upstream 692439 46572673 ~ 46610314 (-)
G408664 NA other upstream 2310162 48221952 ~ 48223220 (-)

Expression


Co-expression Network