Gene
RNA
| Item | Value |
|---|---|
| gene id | G406076 |
| gene name | LOC100136563 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 45977280 ~ 45989483 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Tc1-like transporase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU460687 | False | 3806 | lncRNA | 0.45 | 7 | 45977280 | 45989439 |
| TU460685 | False | 2063 | lncRNA | 0.49 | 9 | 45982838 | 45989439 |
| TU460686 | False | 1335 | TUCP | 0.52 | 10 | 45982838 | 45989483 |
| TU460688 | False | 3841 | lncRNA | 0.46 | 7 | 45982838 | 45989483 |
| TU460689 | False | 3468 | lncRNA | 0.47 | 6 | 45982838 | 45989439 |
| TU460690 | False | 2119 | lncRNA | 0.47 | 7 | 45982838 | 45989439 |
| TU460691 | False | 3635 | lncRNA | 0.45 | 7 | 45982838 | 45989439 |
| TU460693 | True | 4108 | lncRNA | 0.45 | 6 | 45982838 | 45989483 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523936 | LOC106561621 | coding | downstream | 505229 | 45342639 ~ 45472051 (-) |
| morn5 | LOC106561708 | coding | downstream | 925038 | 45035746 ~ 45052242 (-) |
| LOC110522867 | NA | coding | downstream | 983699 | 44970211 ~ 44993581 (-) |
| LOC110523925 | LOC106562826 | coding | downstream | 1044104 | 44915184 ~ 44933176 (-) |
| arl15b | arl15 | coding | downstream | 1124209 | 44779768 ~ 44853071 (-) |
| LOC110523950 | LOC106561514 | coding | upstream | 30215 | 46019698 ~ 46023840 (-) |
| LOC110523952 | LOC106568444 | coding | upstream | 145929 | 46135412 ~ 46171517 (-) |
| LOC110523954 | plgrkt | coding | upstream | 312329 | 46301812 ~ 46322518 (-) |
| LOC110523958 | ermp1 | coding | upstream | 421473 | 46410956 ~ 46450430 (-) |
| LOC110523959 | kiaa2026 | coding | upstream | 478552 | 46468035 ~ 46480496 (-) |
| G406072 | NA | non-coding | downstream | 45824 | 45930040 ~ 45931456 (-) |
| G406062 | NA | non-coding | downstream | 59636 | 45917426 ~ 45917644 (-) |
| G406057 | NA | non-coding | downstream | 65490 | 45911191 ~ 45911790 (-) |
| G406049 | NA | non-coding | downstream | 79312 | 45897684 ~ 45897968 (-) |
| G405987 | NA | non-coding | downstream | 212155 | 45764403 ~ 45765125 (-) |
| G406155 | NA | non-coding | upstream | 78321 | 46067804 ~ 46068042 (-) |
| G406515 | NA | non-coding | upstream | 89659 | 46079142 ~ 46096671 (-) |
| G406566 | NA | non-coding | upstream | 182326 | 46171809 ~ 46172156 (-) |
| G406574 | NA | non-coding | upstream | 207904 | 46197387 ~ 46202512 (-) |
| G406654 | NA | non-coding | upstream | 346317 | 46335800 ~ 46338550 (-) |
| G405889 | LOC106561608 | other | downstream | 364325 | 45612428 ~ 45612955 (-) |
| G405871 | NA | other | downstream | 391097 | 45585648 ~ 45586183 (-) |
| G405292 | LOC106561687 | other | downstream | 784813 | 45191532 ~ 45192467 (-) |
| G404935 | LOC106561730 | other | downstream | 978571 | 44998236 ~ 44998709 (-) |
| G404649 | NA | other | downstream | 1215247 | 44761615 ~ 44762033 (-) |
| G406588 | NA | other | upstream | 230184 | 46219667 ~ 46234537 (-) |
| LOC110523962 | LOC106561388 | other | upstream | 614746 | 46572673 ~ 46610314 (-) |
| G408664 | NA | other | upstream | 2232469 | 48221952 ~ 48223220 (-) |
| G408782 | sec16a | other | upstream | 2363819 | 48353302 ~ 48357565 (-) |
| G406077 | lcn2 | non-coding | downstream | 616 | 45977432 ~ 45982222 (-) |
