XLOC_023370 (cmbl)


Basic Information

Item Value
gene id XLOC_023370
gene name cmbl
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 16912248 ~ 16917086 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00046212
AACAAATGCCAAAACTGTCCTCGCAGCAGGATTCACTCTAAATATTACGAACAACTGCACAGGCCATCTGGATGAACATTTTATTCTGCTAACTCATGATGATTTGCTAAAACATTCAGAGTTACAGGTTGTCTATGGTTGAGAGCATTTGGTGGGCGTTGCTGGAACAGACGACAAACACTGAGTTCTGCAGTCGGTTTCGTCGACTGAATCAGATTTCAACCTTTCGTTTCCATACAGCGCATAAATCTAAGATTCAGCGGTGCGATGGCAAATGAAGCGAAGCCCTGTCCGTGTGATATCGGGGACAAGATTGAATATGGAGGTGTTGGAGAGGAAGTTCAAATCGAGCACATTAAAGCGTATGTGGTGAAGCCTCCAGCATCAGAGAAGGCCATTATTGTAATTCAAGACATTTATGGATGGCAACTTCCAAACACCAGATACATGGCGGATATGCTCTCATCCAACGGATACATTGCTATATGTCCTGATTTCTTTGTTGGGAAAGAGCCTTGGAGCCCATCTCACGACTGGTCAACATTTCCGCAATGGCTTGAAGACAAAAAGCCTACAGAGATCAAGAAGGAAGTAGATGTTGTGTTGAAGTACCTGAAGGATCAGTGCGGTGTGAAGCGGATAGGTGTTGTGGGCTTTTGCTGGGGTGGCGTTTCCACACACTACATTGCTCTTCAGTATGAAGAAATCAAAGCTGGCGTCTCCGTCTATGGTATTGTTCGAGAACGAGAAGACAGGTTTGATCTGAAGAGTCCAACACTTTTCATCTTTGCAGAAAATGATGCAGTCATCCCACTAGATCAGGTGACGACACTAGAGACAAGACTGAAGGAAAAGTGCACTGCTGACTTCCAAGTGAAAATCTTCCCCAAACAGACACATGGCTTTGTCCATCGCAAGAGAGAAGACATCAACCCTGACGACAAACCCTACATAGAGGAAGCAAGGAAGGATATGATCAACTGGTTGAACAAGTACATGTAAATTGCAGGTGAAAGTTAAGTGATAAAAATCAGTTGACTACCCCAGAAAGCTTTTGCACGTCTGTATTTGAGCTAAGACGctaattaaaatgacaaacagGACActaatttgaaaacaaaagtttaatgATCACTTCGTTACGACAATGAACTGTAACAAATGATAAATAACAGTACGAAGGTTCGACACATTCCTTTAGAAGTGCTTGAGACCGTTCATTTCAACACTGCTACAGGACGCTCAGTCTTCAGGCTCGCCGGGGCCTCTGATGTCATCAATCTTCAGAATCATCTTTACAACTTGAGTGGCCAGAGAGATCTGCTGCTTCTTCCCGATAAGGGTCTCGATTACATGCTGCTGCTTCATGTCTGCAAAAaccaaaagtctttttttaatgtcaaatataataaatcaatttATCAATTTAAAACTCGTCAGATAAatgcaattatttatattattggcAAAAGTTTAAACTAGAACACACAGCAATTTTGGGATAAAGTGCATCACTTTCTCTACAAAGATATTACGTCACAAAGGTTTCTCAatgataatagaaaatatttcACCAATGTTGTACATAACTGTACATTGTACATAAATATTAGATTcaaatttaaaagatgatgtcTATTCTGATTTTTGTACACAAAACTCATTCATCATGCGTAATTCCCTTCCATtttattgtttgcttatttacaATAAATCACTAATTTACAATAAAAAGTCCATACCATTCGTTGATAAA

Function

symbol description
cmbl Predicted to enable hydrolase activity. Predicted to be located in cytosol. Orthologous to human CMBL (carboxymethylenebutenolidase homolog).

GO:

id name namespace
GO:0005575 cellular_component cellular_component
GO:0016787 hydrolase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-071004-21 Predicted to enable hydrolase activity. Predicted to be located in cytosol. Orthologous to human CMBL (carboxymethylenebutenolidase homolog).

Ensembl:

ensembl_id ENSDARG00000073786

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00046212 True 1756 mRNA 0.40 6 16912248 16917086

Neighbor

gene id symbol gene type direction distance location
XLOC_023369 mtrr coding downstream 7230 16851213 ~ 16905018 (-)
XLOC_023368 CR354550.1 coding downstream 357265 16554869 ~ 16554983 (-)
XLOC_023367 NA coding downstream 689462 16204788 ~ 16222786 (-)
XLOC_023366 NA coding downstream 764730 16146503 ~ 16147518 (-)
XLOC_023365 CU207257.1 coding downstream 837133 16074089 ~ 16075115 (-)
XLOC_023371 klhl15 coding upstream 45883 16962969 ~ 16980337 (-)
XLOC_023372 ptgdsb.2 coding upstream 104427 17021513 ~ 17023392 (-)
XLOC_023373 ptgdsb.1 coding upstream 110224 17027310 ~ 17029374 (-)
XLOC_023374 c8g coding upstream 114043 17031129 ~ 17039638 (-)
XLOC_023375 msrb2 coding upstream 123125 17040211 ~ 17067284 (-)
XLOC_023665 dre-mir-735 misc upstream 21260875 38177961 ~ 38178027 (-)
XLOC_023364 NA non-coding downstream 1162834 15745070 ~ 15749414 (-)
XLOC_023376 NA non-coding upstream 207324 17124410 ~ 17126986 (-)
XLOC_023377 CR376737.1 non-coding upstream 219663 17136749 ~ 17139114 (-)
XLOC_023378 NA non-coding upstream 316440 17233526 ~ 17236200 (-)
XLOC_023380 NA non-coding upstream 486384 17403470 ~ 17406483 (-)
XLOC_023381 NA non-coding upstream 492222 17409308 ~ 17413946 (-)

Expression


Co-expression Network