Gene
RNA
| Item | Value |
|---|---|
| gene id | G408561 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 48056814 ~ 48059345 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU463464 | True | 1671 | lncRNA | 0.40 | 2 | 48056814 | 48059345 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523978 | LOC106605670 | coding | downstream | 27138 | 48027781 ~ 48029676 (-) |
| LOC110523975 | NA | coding | downstream | 146569 | 47826801 ~ 47910245 (-) |
| LOC118964754 | NA | coding | downstream | 361132 | 47695630 ~ 47695682 (-) |
| LOC110523973 | ctif | coding | downstream | 394144 | 47530422 ~ 47662670 (-) |
| add1 | LOC106561289 | coding | downstream | 839170 | 47163745 ~ 47217644 (-) |
| nup54 | nup54 | coding | upstream | 46982 | 48106327 ~ 48125678 (-) |
| LOC110523983 | LOC106560666 | coding | upstream | 365520 | 48423554 ~ 48489102 (-) |
| pdcl | pdcl | coding | upstream | 480737 | 48540082 ~ 48544432 (-) |
| pdxp | plpp | coding | upstream | 515405 | 48574750 ~ 48580663 (-) |
| mier3a | LOC105008092 | coding | upstream | 587561 | 48646906 ~ 48693022 (-) |
| G408554 | NA | non-coding | downstream | 48781 | 48007689 ~ 48008033 (-) |
| G408553 | NA | non-coding | downstream | 51703 | 48004660 ~ 48005111 (-) |
| G408547 | NA | non-coding | downstream | 66068 | 47989597 ~ 47990746 (-) |
| G408502 | NA | non-coding | downstream | 151452 | 47890529 ~ 47905362 (-) |
| G408406 | NA | non-coding | downstream | 302662 | 47748914 ~ 47754152 (-) |
| G408564 | NA | non-coding | upstream | 4438 | 48063783 ~ 48146011 (-) |
| G408591 | NA | non-coding | upstream | 40987 | 48100332 ~ 48102569 (-) |
| G408623 | LOC106560682 | non-coding | upstream | 104245 | 48163590 ~ 48164373 (-) |
| G408662 | NA | non-coding | upstream | 158127 | 48217472 ~ 48218065 (-) |
| G408663 | NA | non-coding | upstream | 158781 | 48218126 ~ 48218459 (-) |
| LOC110523962 | LOC106561388 | other | downstream | 1446699 | 46572673 ~ 46610314 (-) |
| G406588 | NA | other | downstream | 1822277 | 46219667 ~ 46234537 (-) |
| LOC110523950 | LOC106561514 | other | downstream | 2032974 | 46019698 ~ 46023840 (-) |
| G406076 | LOC100136563 | other | downstream | 2067331 | 45977280 ~ 45989483 (-) |
| G405889 | LOC106561608 | other | downstream | 2443859 | 45612428 ~ 45612955 (-) |
| G408664 | NA | other | upstream | 162607 | 48221952 ~ 48223220 (-) |
| G408782 | sec16a | other | upstream | 293957 | 48353302 ~ 48357565 (-) |
| G410168 | NA | other | upstream | 1474571 | 49533916 ~ 49576456 (-) |
| G411459 | NA | other | upstream | 2559546 | 50618891 ~ 50619175 (-) |
| G411929 | NA | other | upstream | 2662969 | 50722314 ~ 50723061 (-) |
