G408564


Basic Information

Item Value
gene id G408564
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 48063783 ~ 48146011 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU463467
acacacaagtgtaaagggataaagaatatgtacataaagatatatgaatgagtgatggtacagaacggaaataggcaagatgcagtagatggtatagagtacagtatatacatatacatatgagatgagtaatgtagggtatgtaaacattatattaagtagcattggttaaagtggctaatgatatatttttacatcaatttccatcaatttccattattaaagtggctggagttgagtcagagtgttttggcagcagccactcaatgttagtgctggctgtttaacagtctgatggcctggagatagaagttgtttttcagtctctcggtccctgctttgatgcacctgtactgacctcgccttctggatgatagcggggtgaacaggcagtggctcgggtggttgatgtccttgatgatctttatggccttcctgtgacatcgggtggtgtaggcgTCCTGtagggaaggtagtttgcccccggtgatgcgttgtgcagac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU463467 True 504 lncRNA 0.43 2 48063783 48146011

Neighbor

gene id symbol gene type direction distance location
LOC110523978 LOC106605670 coding downstream 34107 48027781 ~ 48029676 (-)
LOC110523975 NA coding downstream 153538 47826801 ~ 47910245 (-)
LOC118964754 NA coding downstream 368101 47695630 ~ 47695682 (-)
LOC110523973 ctif coding downstream 401113 47530422 ~ 47662670 (-)
add1 LOC106561289 coding downstream 846139 47163745 ~ 47217644 (-)
LOC110523983 LOC106560666 coding upstream 278854 48423554 ~ 48489102 (-)
pdcl pdcl coding upstream 394071 48540082 ~ 48544432 (-)
pdxp plpp coding upstream 428739 48574750 ~ 48580663 (-)
mier3a LOC105008092 coding upstream 500895 48646906 ~ 48693022 (-)
LOC110523989 LOC106560554 coding upstream 583972 48729983 ~ 48847550 (-)
G408561 NA non-coding downstream 4438 48056814 ~ 48059345 (-)
G408554 NA non-coding downstream 55750 48007689 ~ 48008033 (-)
G408553 NA non-coding downstream 58672 48004660 ~ 48005111 (-)
G408547 NA non-coding downstream 73037 47989597 ~ 47990746 (-)
G408502 NA non-coding downstream 158421 47890529 ~ 47905362 (-)
G408623 LOC106560682 non-coding upstream 17579 48163590 ~ 48164373 (-)
G408662 NA non-coding upstream 71461 48217472 ~ 48218065 (-)
G408663 NA non-coding upstream 72115 48218126 ~ 48218459 (-)
G408666 NA non-coding upstream 74263 48220274 ~ 48220492 (-)
G408665 NA non-coding upstream 77289 48223300 ~ 48226856 (-)
LOC110523962 LOC106561388 other downstream 1453668 46572673 ~ 46610314 (-)
G406588 NA other downstream 1829246 46219667 ~ 46234537 (-)
LOC110523950 LOC106561514 other downstream 2039943 46019698 ~ 46023840 (-)
G406076 LOC100136563 other downstream 2074300 45977280 ~ 45989483 (-)
G405889 LOC106561608 other downstream 2450828 45612428 ~ 45612955 (-)
G408664 NA other upstream 75941 48221952 ~ 48223220 (-)
G408782 sec16a other upstream 207291 48353302 ~ 48357565 (-)
G410168 NA other upstream 1387905 49533916 ~ 49576456 (-)
G411459 NA other upstream 2472880 50618891 ~ 50619175 (-)
G411929 NA other upstream 2576303 50722314 ~ 50723061 (-)

Expression


Co-expression Network