Gene
RNA
| Item | Value |
|---|---|
| gene id | G408663 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 48218126 ~ 48218459 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU463577 | True | 334 | lncRNA | 0.42 | 1 | 48218126 | 48218459 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nup54 | nup54 | coding | downstream | 92448 | 48106327 ~ 48125678 (-) |
| LOC110523978 | LOC106605670 | coding | downstream | 188450 | 48027781 ~ 48029676 (-) |
| LOC110523975 | NA | coding | downstream | 307881 | 47826801 ~ 47910245 (-) |
| LOC118964754 | NA | coding | downstream | 522444 | 47695630 ~ 47695682 (-) |
| LOC110523973 | ctif | coding | downstream | 555456 | 47530422 ~ 47662670 (-) |
| LOC110523983 | LOC106560666 | coding | upstream | 206406 | 48423554 ~ 48489102 (-) |
| pdcl | pdcl | coding | upstream | 321623 | 48540082 ~ 48544432 (-) |
| pdxp | plpp | coding | upstream | 356291 | 48574750 ~ 48580663 (-) |
| mier3a | LOC105008092 | coding | upstream | 428447 | 48646906 ~ 48693022 (-) |
| LOC110523989 | LOC106560554 | coding | upstream | 511524 | 48729983 ~ 48847550 (-) |
| G408662 | NA | non-coding | downstream | 61 | 48217472 ~ 48218065 (-) |
| G408623 | LOC106560682 | non-coding | downstream | 53753 | 48163590 ~ 48164373 (-) |
| G408564 | NA | non-coding | downstream | 72115 | 48063783 ~ 48146011 (-) |
| G408591 | NA | non-coding | downstream | 115557 | 48100332 ~ 48102569 (-) |
| G408560 | NA | non-coding | downstream | 150055 | 48054088 ~ 48068071 (-) |
| G408666 | NA | non-coding | upstream | 1815 | 48220274 ~ 48220492 (-) |
| G408665 | NA | non-coding | upstream | 4841 | 48223300 ~ 48226856 (-) |
| G408669 | NA | non-coding | upstream | 11706 | 48230165 ~ 48255834 (-) |
| G408667 | NA | non-coding | upstream | 37833 | 48256292 ~ 48279779 (-) |
| G408678 | NA | non-coding | upstream | 129741 | 48348200 ~ 48349152 (-) |
| LOC110523962 | LOC106561388 | other | downstream | 1608011 | 46572673 ~ 46610314 (-) |
| G406588 | NA | other | downstream | 1983589 | 46219667 ~ 46234537 (-) |
| LOC110523950 | LOC106561514 | other | downstream | 2194286 | 46019698 ~ 46023840 (-) |
| G406076 | LOC100136563 | other | downstream | 2228643 | 45977280 ~ 45989483 (-) |
| G405889 | LOC106561608 | other | downstream | 2605171 | 45612428 ~ 45612955 (-) |
| G408664 | NA | other | upstream | 3493 | 48221952 ~ 48223220 (-) |
| G408782 | sec16a | other | upstream | 134843 | 48353302 ~ 48357565 (-) |
| G410168 | NA | other | upstream | 1315457 | 49533916 ~ 49576456 (-) |
| G411459 | NA | other | upstream | 2400432 | 50618891 ~ 50619175 (-) |
| G411929 | NA | other | upstream | 2503855 | 50722314 ~ 50723061 (-) |
