Gene
RNA
| Item | Value |
|---|---|
| gene id | G408666 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 48220274 ~ 48220492 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| AF4/FMR2 family member 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU463581 | True | 219 | lncRNA | 0.61 | 1 | 48220274 | 48220492 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nup54 | nup54 | coding | downstream | 94596 | 48106327 ~ 48125678 (-) |
| LOC110523978 | LOC106605670 | coding | downstream | 190598 | 48027781 ~ 48029676 (-) |
| LOC110523975 | NA | coding | downstream | 310029 | 47826801 ~ 47910245 (-) |
| LOC118964754 | NA | coding | downstream | 524592 | 47695630 ~ 47695682 (-) |
| LOC110523973 | ctif | coding | downstream | 557604 | 47530422 ~ 47662670 (-) |
| LOC110523983 | LOC106560666 | coding | upstream | 204373 | 48423554 ~ 48489102 (-) |
| pdcl | pdcl | coding | upstream | 319590 | 48540082 ~ 48544432 (-) |
| pdxp | plpp | coding | upstream | 354258 | 48574750 ~ 48580663 (-) |
| mier3a | LOC105008092 | coding | upstream | 426414 | 48646906 ~ 48693022 (-) |
| LOC110523989 | LOC106560554 | coding | upstream | 509491 | 48729983 ~ 48847550 (-) |
| G408663 | NA | non-coding | downstream | 1815 | 48218126 ~ 48218459 (-) |
| G408662 | NA | non-coding | downstream | 2209 | 48217472 ~ 48218065 (-) |
| G408623 | LOC106560682 | non-coding | downstream | 55901 | 48163590 ~ 48164373 (-) |
| G408564 | NA | non-coding | downstream | 74263 | 48063783 ~ 48146011 (-) |
| G408591 | NA | non-coding | downstream | 117705 | 48100332 ~ 48102569 (-) |
| G408665 | NA | non-coding | upstream | 2808 | 48223300 ~ 48226856 (-) |
| G408669 | NA | non-coding | upstream | 9673 | 48230165 ~ 48255834 (-) |
| G408667 | NA | non-coding | upstream | 35800 | 48256292 ~ 48279779 (-) |
| G408678 | NA | non-coding | upstream | 127708 | 48348200 ~ 48349152 (-) |
| G408787 | NA | non-coding | upstream | 139925 | 48360417 ~ 48360742 (-) |
| LOC110523962 | LOC106561388 | other | downstream | 1610159 | 46572673 ~ 46610314 (-) |
| G406588 | NA | other | downstream | 1985737 | 46219667 ~ 46234537 (-) |
| LOC110523950 | LOC106561514 | other | downstream | 2196434 | 46019698 ~ 46023840 (-) |
| G406076 | LOC100136563 | other | downstream | 2230791 | 45977280 ~ 45989483 (-) |
| G405889 | LOC106561608 | other | downstream | 2607319 | 45612428 ~ 45612955 (-) |
| G408664 | NA | other | upstream | 1460 | 48221952 ~ 48223220 (-) |
| G408782 | sec16a | other | upstream | 132810 | 48353302 ~ 48357565 (-) |
| G410168 | NA | other | upstream | 1313424 | 49533916 ~ 49576456 (-) |
| G411459 | NA | other | upstream | 2398399 | 50618891 ~ 50619175 (-) |
| G411929 | NA | other | upstream | 2501822 | 50722314 ~ 50723061 (-) |
