Gene
RNA
| Item | Value |
|---|---|
| gene id | G408821 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 48401165 ~ 48401479 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU463751 | True | 315 | lncRNA | 0.36 | 1 | 48401165 | 48401479 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nup54 | nup54 | coding | downstream | 275487 | 48106327 ~ 48125678 (-) |
| LOC110523978 | LOC106605670 | coding | downstream | 371489 | 48027781 ~ 48029676 (-) |
| LOC110523975 | NA | coding | downstream | 490920 | 47826801 ~ 47910245 (-) |
| LOC118964754 | NA | coding | downstream | 705483 | 47695630 ~ 47695682 (-) |
| LOC110523973 | ctif | coding | downstream | 738495 | 47530422 ~ 47662670 (-) |
| LOC110523983 | LOC106560666 | coding | upstream | 23386 | 48423554 ~ 48489102 (-) |
| pdcl | pdcl | coding | upstream | 138603 | 48540082 ~ 48544432 (-) |
| pdxp | plpp | coding | upstream | 173271 | 48574750 ~ 48580663 (-) |
| mier3a | LOC105008092 | coding | upstream | 245427 | 48646906 ~ 48693022 (-) |
| LOC110523989 | LOC106560554 | coding | upstream | 328504 | 48729983 ~ 48847550 (-) |
| G408820 | NA | non-coding | downstream | 74 | 48400022 ~ 48401091 (-) |
| G408817 | NA | non-coding | downstream | 4065 | 48396748 ~ 48397100 (-) |
| G408787 | NA | non-coding | downstream | 40423 | 48360417 ~ 48360742 (-) |
| G408678 | NA | non-coding | downstream | 52013 | 48348200 ~ 48349152 (-) |
| G408667 | NA | non-coding | downstream | 121386 | 48256292 ~ 48279779 (-) |
| G408824 | NA | non-coding | upstream | 10185 | 48411664 ~ 48412145 (-) |
| G408823 | NA | non-coding | upstream | 11775 | 48413254 ~ 48413985 (-) |
| G408825 | NA | non-coding | upstream | 13496 | 48414975 ~ 48415257 (-) |
| G408826 | sec16a | non-coding | upstream | 13862 | 48415341 ~ 48415734 (-) |
| G408782 | sec16a | other | downstream | 43600 | 48353302 ~ 48357565 (-) |
| G408664 | NA | other | downstream | 177945 | 48221952 ~ 48223220 (-) |
| LOC110523962 | LOC106561388 | other | downstream | 1791050 | 46572673 ~ 46610314 (-) |
| G406588 | NA | other | downstream | 2166628 | 46219667 ~ 46234537 (-) |
| LOC110523950 | LOC106561514 | other | downstream | 2377325 | 46019698 ~ 46023840 (-) |
| G410168 | NA | other | upstream | 1132437 | 49533916 ~ 49576456 (-) |
| G411459 | NA | other | upstream | 2217412 | 50618891 ~ 50619175 (-) |
| G411929 | NA | other | upstream | 2320835 | 50722314 ~ 50723061 (-) |
| G411930 | NA | other | upstream | 2321680 | 50723159 ~ 50724077 (-) |
| LOC110524003 | LOC106613485 | other | upstream | 2778279 | 51179758 ~ 51228505 (-) |
