Gene
RNA
| Item | Value |
|---|---|
| gene id | G408895 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 48552887 ~ 48553199 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU463849 | True | 313 | lncRNA | 0.36 | 1 | 48552887 | 48553199 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pdcl | pdcl | coding | downstream | 8455 | 48540082 ~ 48544432 (-) |
| LOC110523983 | LOC106560666 | coding | downstream | 104999 | 48423554 ~ 48489102 (-) |
| nup54 | nup54 | coding | downstream | 427209 | 48106327 ~ 48125678 (-) |
| LOC110523978 | LOC106605670 | coding | downstream | 523211 | 48027781 ~ 48029676 (-) |
| LOC110523975 | NA | coding | downstream | 642642 | 47826801 ~ 47910245 (-) |
| pdxp | plpp | coding | upstream | 21551 | 48574750 ~ 48580663 (-) |
| mier3a | LOC105008092 | coding | upstream | 93707 | 48646906 ~ 48693022 (-) |
| LOC110523989 | LOC106560554 | coding | upstream | 176784 | 48729983 ~ 48847550 (-) |
| notch1 | notch1 | coding | upstream | 328194 | 48881393 ~ 48954869 (-) |
| col27a1a | LOC106560409 | coding | upstream | 535336 | 49088535 ~ 49370988 (-) |
| G408894 | NA | non-coding | downstream | 419 | 48552224 ~ 48552468 (-) |
| G408891 | NA | non-coding | downstream | 7522 | 48545069 ~ 48545365 (-) |
| G408856 | NA | non-coding | downstream | 15847 | 48532422 ~ 48537040 (-) |
| G408875 | NA | non-coding | downstream | 39057 | 48513620 ~ 48513830 (-) |
| G408873 | NA | non-coding | downstream | 43052 | 48509537 ~ 48509835 (-) |
| G408912 | NA | non-coding | upstream | 32228 | 48585427 ~ 48585672 (-) |
| G408914 | NA | non-coding | upstream | 33323 | 48586522 ~ 48586734 (-) |
| G408916 | NA | non-coding | upstream | 34260 | 48587459 ~ 48587782 (-) |
| G409219 | NA | non-coding | upstream | 52454 | 48605653 ~ 48606623 (-) |
| G409218 | NA | non-coding | upstream | 88015 | 48641214 ~ 48645375 (-) |
| G408782 | sec16a | other | downstream | 195322 | 48353302 ~ 48357565 (-) |
| G408664 | NA | other | downstream | 329667 | 48221952 ~ 48223220 (-) |
| LOC110523962 | LOC106561388 | other | downstream | 1942772 | 46572673 ~ 46610314 (-) |
| G406588 | NA | other | downstream | 2318350 | 46219667 ~ 46234537 (-) |
| LOC110523950 | LOC106561514 | other | downstream | 2529047 | 46019698 ~ 46023840 (-) |
| G410168 | NA | other | upstream | 980717 | 49533916 ~ 49576456 (-) |
| G411459 | NA | other | upstream | 2065692 | 50618891 ~ 50619175 (-) |
| G411929 | NA | other | upstream | 2169115 | 50722314 ~ 50723061 (-) |
| G411930 | NA | other | upstream | 2169960 | 50723159 ~ 50724077 (-) |
| LOC110524003 | LOC106613485 | other | upstream | 2626559 | 51179758 ~ 51228505 (-) |
