Gene
RNA
| Item | Value |
|---|---|
| gene id | G409308 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 48788932 ~ 48796706 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU464327 | True | 660 | lncRNA | 0.40 | 2 | 48788932 | 48796706 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mier3a | LOC105008092 | coding | downstream | 95910 | 48646906 ~ 48693022 (-) |
| pdxp | plpp | coding | downstream | 208269 | 48574750 ~ 48580663 (-) |
| pdcl | pdcl | coding | downstream | 244500 | 48540082 ~ 48544432 (-) |
| LOC110523983 | LOC106560666 | coding | downstream | 341044 | 48423554 ~ 48489102 (-) |
| nup54 | nup54 | coding | downstream | 663254 | 48106327 ~ 48125678 (-) |
| notch1 | notch1 | coding | upstream | 84687 | 48881393 ~ 48954869 (-) |
| col27a1a | LOC106560409 | coding | upstream | 291829 | 49088535 ~ 49370988 (-) |
| LOC110523994 | rax | coding | upstream | 861280 | 49657986 ~ 49663582 (-) |
| LOC110522869 | LOC106613981 | coding | upstream | 1348272 | 50144978 ~ 50150252 (-) |
| LOC118964617 | NA | coding | upstream | 1634014 | 50416344 ~ 50468752 (-) |
| G409218 | NA | non-coding | downstream | 143557 | 48641214 ~ 48645375 (-) |
| G409219 | NA | non-coding | downstream | 182309 | 48605653 ~ 48606623 (-) |
| G408916 | NA | non-coding | downstream | 201150 | 48587459 ~ 48587782 (-) |
| G408914 | NA | non-coding | downstream | 202198 | 48586522 ~ 48586734 (-) |
| G408912 | NA | non-coding | downstream | 203260 | 48585427 ~ 48585672 (-) |
| G409418 | NA | non-coding | upstream | 190096 | 48986802 ~ 48987055 (-) |
| G409424 | NA | non-coding | upstream | 194846 | 48991552 ~ 48991777 (-) |
| G409433 | NA | non-coding | upstream | 201193 | 48997899 ~ 48998109 (-) |
| G409909 | NA | non-coding | upstream | 225907 | 49022613 ~ 49022850 (-) |
| G409914 | NA | non-coding | upstream | 231956 | 49028662 ~ 49028942 (-) |
| G408782 | sec16a | other | downstream | 431367 | 48353302 ~ 48357565 (-) |
| G408664 | NA | other | downstream | 565712 | 48221952 ~ 48223220 (-) |
| LOC110523962 | LOC106561388 | other | downstream | 2178817 | 46572673 ~ 46610314 (-) |
| G406588 | NA | other | downstream | 2554395 | 46219667 ~ 46234537 (-) |
| LOC110523950 | LOC106561514 | other | downstream | 2765092 | 46019698 ~ 46023840 (-) |
| G410168 | NA | other | upstream | 737210 | 49533916 ~ 49576456 (-) |
| G411459 | NA | other | upstream | 1822185 | 50618891 ~ 50619175 (-) |
| G411929 | NA | other | upstream | 1925608 | 50722314 ~ 50723061 (-) |
| G411930 | NA | other | upstream | 1926453 | 50723159 ~ 50724077 (-) |
| LOC110524003 | LOC106613485 | other | upstream | 2383052 | 51179758 ~ 51228505 (-) |
