Gene
RNA
| Item | Value |
|---|---|
| gene id | G410214 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 49500209 ~ 49500664 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Tc1-like transporase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU465285 | True | 393 | lncRNA | 0.44 | 2 | 49500209 | 49500664 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| col27a1a | LOC106560409 | coding | downstream | 129221 | 49088535 ~ 49370988 (-) |
| notch1 | notch1 | coding | downstream | 545340 | 48881393 ~ 48954869 (-) |
| LOC110523989 | LOC106560554 | coding | downstream | 652659 | 48729983 ~ 48847550 (-) |
| mier3a | LOC105008092 | coding | downstream | 807187 | 48646906 ~ 48693022 (-) |
| pdxp | plpp | coding | downstream | 919546 | 48574750 ~ 48580663 (-) |
| LOC110523994 | rax | coding | upstream | 157322 | 49657986 ~ 49663582 (-) |
| LOC110522869 | LOC106613981 | coding | upstream | 644314 | 50144978 ~ 50150252 (-) |
| LOC118964617 | NA | coding | upstream | 930056 | 50416344 ~ 50468752 (-) |
| LOC110523998 | LOC106613480 | coding | upstream | 1324945 | 50825609 ~ 50987810 (-) |
| kif14 | LOC106613482 | coding | upstream | 1487225 | 50987889 ~ 51039285 (-) |
| G410006 | NA | non-coding | downstream | 285522 | 49176268 ~ 49214687 (-) |
| G409924 | NA | non-coding | downstream | 446316 | 49053490 ~ 49053893 (-) |
| G409914 | NA | non-coding | downstream | 471267 | 49028662 ~ 49028942 (-) |
| G409909 | NA | non-coding | downstream | 477359 | 49022613 ~ 49022850 (-) |
| G409433 | NA | non-coding | downstream | 502100 | 48997899 ~ 48998109 (-) |
| G410217 | NA | non-coding | upstream | 5123 | 49505787 ~ 49508334 (-) |
| G410272 | NA | non-coding | upstream | 116175 | 49616839 ~ 49617041 (-) |
| G410336 | NA | non-coding | upstream | 233330 | 49733994 ~ 49734201 (-) |
| G410339 | NA | non-coding | upstream | 235824 | 49736488 ~ 49736763 (-) |
| G410658 | NA | non-coding | upstream | 349340 | 49850004 ~ 49852736 (-) |
| G408782 | sec16a | other | downstream | 1142644 | 48353302 ~ 48357565 (-) |
| G408664 | NA | other | downstream | 1276989 | 48221952 ~ 48223220 (-) |
| LOC110523962 | LOC106561388 | other | downstream | 2890094 | 46572673 ~ 46610314 (-) |
| G406588 | NA | other | downstream | 3265672 | 46219667 ~ 46234537 (-) |
| LOC110523950 | LOC106561514 | other | downstream | 3476369 | 46019698 ~ 46023840 (-) |
| G410168 | NA | other | upstream | 33252 | 49533916 ~ 49576456 (-) |
| G411459 | NA | other | upstream | 1118227 | 50618891 ~ 50619175 (-) |
| G411929 | NA | other | upstream | 1221650 | 50722314 ~ 50723061 (-) |
| G411930 | NA | other | upstream | 1222495 | 50723159 ~ 50724077 (-) |
| LOC110524003 | LOC106613485 | other | upstream | 1679094 | 51179758 ~ 51228505 (-) |
